| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0536 |
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| Symbol | rpmE |
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| ID | 5613680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 655695 |
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| End bp | 655907 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640931381 |
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| Product | 50S ribosomal protein L31 |
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| Protein accession | YP_001472276 |
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| Protein GI | 157373676 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0254] Ribosomal protein L31 |
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| TIGRFAM ID | [TIGR00105] ribosomal protein L31 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCAG ATATCCATCC AGCATATGCA GAAATCACTG CAACTTGTAC TTGTGGTAAC
GTAATTAAAG TAAATTCAAC TGCAGGTAAA GCTCTGCACT TGGACGTATG TGGTGCATGT
CACCCATTCT ACACTGGTAC ACAGAAAATT GTGGACACTG GTGGACGTAT CGACAAGTTC
AACAAGCGCT TCGGTGCTCT TGGTAAGAAG TAA
|
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| Protein sequence | MKADIHPAYA EITATCTCGN VIKVNSTAGK ALHLDVCGAC HPFYTGTQKI VDTGGRIDKF
NKRFGALGKK
|
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