| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0525 |
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| Symbol | |
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| ID | 5613981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 640603 |
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| End bp | 641556 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931370 |
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| Product | Nitrilase |
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| Protein accession | YP_001472265 |
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| Protein GI | 157373665 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0388] Predicted amidohydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGG TTGTGACTAT GCCTAAAATC GCCATCGTTC AAGAGTCTCC GATATTGCTG
GATCGTGATG CCACCATCGA AAAAGCGGTG ACATTGATTG AAGAGGCTGC ATCAGCGGGC
GCCGAGTTAG TGGTATTTCC CGAGGCGTTT ATCGCCGGAT ATCCTGCCTG GATCTGGCGC
CTACGCCCCG GTGGAGATTG GGGGACCAGT GAAGCCCTGC ATGCCAGATT ATTCCACAGT
TCCGTCGATA TCGAGGCCGG TGAACTCGTT CCGCTTTGTA GTGCCGCACG GGCAAATCAG
GTCACGGTGA TTTGCGGCAT GAACGAACGT GATGGACTGC AGAGTCGGGC GACCTTATAT
AATACCGTGG TGATTATTGG TAGTGATGGC CTGATACTCA ATCGCCATCG AAAGCTGATG
CCTACTAATC CTGAACGTAT GGTATGGGGA TTTGGAGATG GTTCCAGCCT GAAAGTGGTC
GACTCTCACG TTGGCAGGAT TTCGACTCTG CTATGCTGGG AAAACTACAT GCCTCTGGCC
AGGTATACCC TCTATTCCCA GGGAGTTGAA ATCTATGTCG CGCCCACTTA TGACAGCGGT
GACGGCTGGA TAGGCACGAT GCAGCATATT GCGAGAGAGG GACGTTGCTG GGTCATATGC
AGTGGGGTCG TCCTTGAGCA TAGCGATCTA CCCGATGACT TTCCCGATAA AGAGAAGCTC
TACCCGGATA GTGAAGAGTG GATCAACCCG GGTGACTCAG TCGTGGTCGC TCCGGGTGGA
GAGATTGTCG CTGGGCCTAT GAGAAGAGAG AAGGGCATAC TGTACGCCGA AGTCGATTCT
GTGGCCGTGG CAACATCCAA AAGAGCACTG GATGTGGCGG GGCACTATTC CAGACCCGAT
ATCTTTACTC TCGAGGTGAA TACCCAGGTT CAGAACTCAA TTAAGTTTAA ATAG
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| Protein sequence | MKKVVTMPKI AIVQESPILL DRDATIEKAV TLIEEAASAG AELVVFPEAF IAGYPAWIWR
LRPGGDWGTS EALHARLFHS SVDIEAGELV PLCSAARANQ VTVICGMNER DGLQSRATLY
NTVVIIGSDG LILNRHRKLM PTNPERMVWG FGDGSSLKVV DSHVGRISTL LCWENYMPLA
RYTLYSQGVE IYVAPTYDSG DGWIGTMQHI AREGRCWVIC SGVVLEHSDL PDDFPDKEKL
YPDSEEWINP GDSVVVAPGG EIVAGPMRRE KGILYAEVDS VAVATSKRAL DVAGHYSRPD
IFTLEVNTQV QNSIKFK
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