| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0518 |
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| Symbol | |
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| ID | 5614163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 635060 |
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| End bp | 635530 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640931364 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472259 |
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| Protein GI | 157373659 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03146] cytochrome c nitrite reductase, pentaheme subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCTAGTT TTAAAAAAGT TTTCACCCTC TCTATACTGA CTTTGACTAC ATTTATTTCA
ACGCCACTTT CTATTTCTTA TGCAAACACG CTTGAGTTAA CAATCAACAC CAACAAGCAA
TGCATCATGT GCCATAAGAA AAATGGGAAA ATGTTCGGCA TTCATTCTAG CAACTCATTA
GAGTTACGTT GCCAAAATTG CCACAGAGAA AAAGAAGGTC ACCCAAGGAA AAAATCAAGC
CTAATAAAAT TTAGTGACCA TTCACTCAAC ACAGCTGAAG AGCAAACCGC AGTTTGCACT
ACATGCCATA ACTCCGATGA TTTAACCGAA GTAGATTGGA CTCATGCAGT TCACTCAAAC
AAAGTTAATT GTGCTAAGTG CCATCAATTA CATACTGAGA CAGATCCAGT TATTGCAATT
TCAACAGGTG AGCGCCGTCA GCTATGCGTT AACTGCCATG AAAGCCGATA A
|
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| Protein sequence | MSSFKKVFTL SILTLTTFIS TPLSISYANT LELTINTNKQ CIMCHKKNGK MFGIHSSNSL
ELRCQNCHRE KEGHPRKKSS LIKFSDHSLN TAEEQTAVCT TCHNSDDLTE VDWTHAVHSN
KVNCAKCHQL HTETDPVIAI STGERRQLCV NCHESR
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