| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0507 |
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| Symbol | |
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| ID | 5614121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 622689 |
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| End bp | 622946 |
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| Gene Length | 258 bp |
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| Protein Length | 85 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640931352 |
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| Product | toxin secretion, membrane fusion protein |
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| Protein accession | YP_001472248 |
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| Protein GI | 157373648 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGGAA TATTCAGAAG GCAAGCCGTA GAGGCTCAAA AAAATAAGTT GCATGGTGAT
ATTTCACTGG CGCAACCCTT GTCAATTTAT AGTGTCGTTC TTGCACTTCT CGCTATTGTT
GTAGCCACAT CCATTTTTCT CTCTTTTTCA AATTATGCAC GTAAGGAAAC GGTTAGAGGC
TATATCGTTC CAGATAAAGG TGTAATAAAA ACCCATGCAA GCCGAAGTGG GAATGTAATG
TTAATAATTT TAAGTTAA
|
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| Protein sequence | MTGIFRRQAV EAQKNKLHGD ISLAQPLSIY SVVLALLAIV VATSIFLSFS NYARKETVRG
YIVPDKGVIK THASRSGNVM LIILS
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