| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0502 |
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| Symbol | |
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| ID | 5613917 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 616515 |
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| End bp | 617345 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640931347 |
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| Product | copper ABC transporter, permease protein |
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| Protein accession | YP_001472243 |
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| Protein GI | 157373643 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTATTTC ACTCATCAGT ATTGGTCATC GCTAAAAAAG AGATCCGGGA TAGCCTGAGG
AATCGATGGG TAACCTTTAT CTCGCTTATT TTTTTGCTTC TCTCTCTTAG TGTTACGTTT
GCAGGTAGTG CCGTTGTTGG TCAATTGGCG TTGCCGAAGT TGGATGCCCT GATATCGAGT
CTATCTACAA TTTCTGTATT TATTATTCCG TTAGCGGCAA TGTTAGTCAG TTACGATGCC
TTCATTGGGG AGGATGAGTC CGGGACTCTA CTGTTATTAC TCTCCTATCC ACTGTCCAGG
TTTCAAATTT TATCGGGTAA GCTTATCGGG CACAGTGTGA TTATGAGTTT TACTATCAGT
TTCGCTTTTG GACTGACAGC TGTGCTCTTG CTTATATTCG GTGATAACTA TGACGTTGCC
GCCACAGTCG GTCAGTTTAG TCAGTTTATT TTGACCAGCA TATTACTCGC GATCACGTTT
ATTTTACTGG GCTATATTGT CAGCTTAAAA GCGACTGAAA AAGCTAAGGC GGTTGCGACG
GTTCTGTTTG TTTGGTTTCT GTTCGTGCTT ATCTATGATC TCTTGCTGTT GACGCTATTA
GTTGCCGATA TTTCATTCTT TAATCAGTAT ATTATCAATG TCTTAATTGC ACTAAATCCT
ACGGATCTGT ATCGCGCAAT TAATCTTATC GGTACCGATG CGAGCAAGGG GAGCCTTGCT
ACATTATCTG CATCGGGTTG GGGAAAAATC GCGCTTTATC TTGTAATGGG TTTGTGGGTT
TCAGGTTTGA TGCTTGTTGC TAACTTCGTG TTTAAACGTA GGCAGCTATA G
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| Protein sequence | MLFHSSVLVI AKKEIRDSLR NRWVTFISLI FLLLSLSVTF AGSAVVGQLA LPKLDALISS
LSTISVFIIP LAAMLVSYDA FIGEDESGTL LLLLSYPLSR FQILSGKLIG HSVIMSFTIS
FAFGLTAVLL LIFGDNYDVA ATVGQFSQFI LTSILLAITF ILLGYIVSLK ATEKAKAVAT
VLFVWFLFVL IYDLLLLTLL VADISFFNQY IINVLIALNP TDLYRAINLI GTDASKGSLA
TLSASGWGKI ALYLVMGLWV SGLMLVANFV FKRRQL
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