| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0501 |
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| Symbol | |
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| ID | 5613693 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 615611 |
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| End bp | 616513 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640931346 |
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| Product | ABC transporter-related protein |
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| Protein accession | YP_001472242 |
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| Protein GI | 157373642 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTG CTGTTTCTGC CAGAAATATA AGCCACAATT TTGGGGCTGA TGTTGCACTC
GATGATGTGA GTTTCGAGAT GAAACAAGGG CAAACGATGG CGTTGCTCGG TCATAACGGT
GCAGGTAAAT CTACCCTGAT AAAGATCTTG CTCGGTTTGA TCACACCTAC TGGAGGTGTG
ATCAATATTT TAGGGCGGAA TATAAGAAAA AATACCAGTC GTTCGGACCT GAAGTTAGGG
TACCTTCCTG AAAATGTGAG CTTTTATGAT AAGTTGACCG GCGAGGAGAT TTTAACCTAT
TTTGCTGAGC TCAAGGGGGT AGGAAAAAAC AGAGTCTGTG AATTAATAGA GGAGTTTGGT
TTAGGTTATG CCAAAGACAG GGCATTAAAA ACCTACTCTA AAGGGATGAA GCAAAGGTTA
GGCTTTGCCC AGGCGATTCT CTGTGAGCCG GAGTTATTGC TGCTCGATGA GCCTACCGTC
GGATTAGATC CCGTTGCCTC TCAATTTCTC TATGGAAAAA TTGATGAGCT CAAGCGGCTT
GGCTGTGCTG TTATTGTCTG TACCCATGAA TTATCACTCA TTGAAAACAA TATCGATACC
GCCCTTATCT TAGGTAAGGG TCGGTGTCTG GCATCCGGGA ACCTCGGCGA ACTCAGATAT
GAGAGTCGGT TAAAAACAAG GTTAACCTCT CCTTCATTAG CTGCGTTGGT GAATGACAGC
GAGCGATTAG CCTCTCTTTA TACCGATAAT GCGCTGTTGC TGGATAGCGA GAGCAAGCAA
GATGTCGTTC AATATTTAAC TGCCGAGTGT GGTCTGTTTG ATTTTGCTCT GAAAGAGCCG
GGTTTAGCCG AGATCTATCA TTTTCATATG CAGAAGTATT CTCAGCTTGG AGTCGTTAGT
TAA
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| Protein sequence | MNTAVSARNI SHNFGADVAL DDVSFEMKQG QTMALLGHNG AGKSTLIKIL LGLITPTGGV
INILGRNIRK NTSRSDLKLG YLPENVSFYD KLTGEEILTY FAELKGVGKN RVCELIEEFG
LGYAKDRALK TYSKGMKQRL GFAQAILCEP ELLLLDEPTV GLDPVASQFL YGKIDELKRL
GCAVIVCTHE LSLIENNIDT ALILGKGRCL ASGNLGELRY ESRLKTRLTS PSLAALVNDS
ERLASLYTDN ALLLDSESKQ DVVQYLTAEC GLFDFALKEP GLAEIYHFHM QKYSQLGVVS
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