| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0500 |
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| Symbol | |
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| ID | 5613692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 614295 |
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| End bp | 615584 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931345 |
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| Product | periplasmic copper-binding |
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| Protein accession | YP_001472241 |
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| Protein GI | 157373641 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3420] Nitrous oxidase accessory protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTCGCA TCTGCCTTTT GGCTGTTATT TTTGGCTTCT CCGCTCTCTC CCAAGCCGGA
AGTGCCACGG TATTCGATAC CGAAAGCCTT AGGTTAGAGT TAGAGCATGC CAATCCGGGC
GATCACATCA TACTCAACCC TGGTCTATAT GAAGGCCGGT TCGACATAGA AAAGCCTCTC
TCCCTTTCCA GCCGCGGTGG TAGCACTATT GATGCACAGG GAGAGGGAAG TGCTATCACC
ATCCACTCAT CTGGTGTAGA GATCTCAGGG CTCACCATAG AGCACTGGGG AAACGATCAC
TACGAGCGAG ACTCGGGTAT CTTGGTGATG GCGGGCAGCG ATGATGTCAG CATCAATAAT
AACCGGCTAT CCGGAGACGG TTTCGGCATC AGAGCCGATG AGCTAAATCG GATCAAGATC
AATGACAATA TTGTCACAGG CAACGCTTCG CTATATAAGC TAGATCGGGG CGATGGCATC
CATCTTGACC ATGTCGTCGG GGCTGAGGTG TGGGGCAATG TCATCTCTCA CGTCAGAGAC
GGTGTCTATA TAGAGTCTGG AAGTCACAGC AAGGTAGCCG GTAATCGCTT CTTCGAGCAA
CAGTATGGCA TTCACTATAT GTACTCCAGC ATGGATGAAG CCTTCAACAA TCAAAGTTAT
CGTGTCGATG GTGGGTATGC TCTGATGAGT TCAAAGCAGA TCCATCTGCA CAGCAATCAG
GTCTGGGATG CCGTCGATTT TGGTATCCTG CTTAATATGA GCCAGGATTC GGTCATTGAG
GGCAACCGAG TCGAGCAGAT CCTTAATCCT GATGAGAATC CGGTTCAGGG TAAAGAGGGA
AAGGGGATCT TCATCTATGG TGCCAGAGAT AATCGGGTCG TCGGAAATCG TTTTTCACTT
TGCGATATCG GTTTCTATAT GGCCATGGGC GGTGAAGGAA ATCTGGTCTA TGAAAATCAG
TTTGTCGATA ACTTCAGTCA GGTTAAATAT GTAGGCGATA AGCTACTTGA GTGGAGTAAA
GATGGACGTG GAAACCACTG GAGCGGATAT CTGGGGTGGG ATCACAGTTC TGACGGTATT
GGCAATAGCC CGTATCGCCC AAATGATAAT ATCGATAGGC TATTCTGGCT CTACCCGGAA
GCGAATTTCT TGATGGGAAG TCCGATAGTG ATGGTGCTTA GATGGGTGCA GAGACAGTTT
GAGATTGGTG AGCCCAGCGG CATTATCGAT AGCTACCCTC TTCTTAATTT TACTCCCCCA
TTCGATTTCG AGTTTGGCGT TCCTCATTGA
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| Protein sequence | MFRICLLAVI FGFSALSQAG SATVFDTESL RLELEHANPG DHIILNPGLY EGRFDIEKPL
SLSSRGGSTI DAQGEGSAIT IHSSGVEISG LTIEHWGNDH YERDSGILVM AGSDDVSINN
NRLSGDGFGI RADELNRIKI NDNIVTGNAS LYKLDRGDGI HLDHVVGAEV WGNVISHVRD
GVYIESGSHS KVAGNRFFEQ QYGIHYMYSS MDEAFNNQSY RVDGGYALMS SKQIHLHSNQ
VWDAVDFGIL LNMSQDSVIE GNRVEQILNP DENPVQGKEG KGIFIYGARD NRVVGNRFSL
CDIGFYMAMG GEGNLVYENQ FVDNFSQVKY VGDKLLEWSK DGRGNHWSGY LGWDHSSDGI
GNSPYRPNDN IDRLFWLYPE ANFLMGSPIV MVLRWVQRQF EIGEPSGIID SYPLLNFTPP
FDFEFGVPH
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