| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0498 |
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| Symbol | |
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| ID | 5613317 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 612681 |
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| End bp | 613628 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931343 |
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| Product | polysulphide reductase, NrfD |
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| Protein accession | YP_001472239 |
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| Protein GI | 157373639 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGGTT CAATGGAATT CACTATGGGG CTATCTGATG GTATCGCCTG GCCCTGGCCC
ATCGCGGTTT ACCTGTTCTT TGCAGGGATA TCGGGTGGGG CGATAGCAAC AGCGATATTT
ATTCGTTTCT ATAAAGGTCA GACTGAAAAT ACGCCTTTTT ATAAAGCGGC TGCACTGATC
TCGTTTGTGA CCATCAGCTT AGGTATGTTG TGCCTGGTGC TCGATTTGAC CAATCCACTG
TTCTTCTGGC GGATACTGGT TTACTACAAC CTTAACTCAG TGATGTCGAT AGGTGTTATT
GCACTGACAG CGTATATTCC GCTAGTGGCC TTAATCACCC TATTCGCTTT CGAAGATGAG
ATCCGTAAGA TCCCTGCATT GGGCATGTTA CTGCCAGTGA TTGATAAGCT AAAAGGAGTG
CGTCGCCCAT GTGAGGTTGC AGTACTGATT TTAGCTATGG CGGTGTGTGC GTATACCGGC
TTCCTTATCT CGGCGCTTAT TCGTTTTCCT ATCATCAACA CCTCTGTATT GCCGGCGCTA
TTTATTGCGT CTGGTATTTC AGCCGGTGCA GCAAGTGCGA AAATGCTGGC TGTATCTATG
TTTAAGGAGG AGATGCACAG CCAGGATATG AAGCTTCTAC ATGGGGCCGA ATGGCCAATC
ATGGCAGCCG AGATCCTATT TATCTTTATG ATAGCTATGT CTCTGTTTAC CGGTAATGCT
GGTATGCAAA GCGCGTTCTC TGCTTTCCAT ATAGGTGACT GGGCCGGCGT ATTTTGGCTT
GGGGTTGTAG GGGTAGGATT TTGTGGCCCG CTACTACTTA ACTTTGCAAC GAGTAAGCGT
GTTAGCCACT CAGCGCAAGC CTTCTATGCA TCAGGTGTCT GTGCTGTCAC AGGTATGATG
TGCCTGCGAC TATTCATCAT CTATGCGGGT CAGAACTTTG CGATTTAA
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| Protein sequence | MDGSMEFTMG LSDGIAWPWP IAVYLFFAGI SGGAIATAIF IRFYKGQTEN TPFYKAAALI
SFVTISLGML CLVLDLTNPL FFWRILVYYN LNSVMSIGVI ALTAYIPLVA LITLFAFEDE
IRKIPALGML LPVIDKLKGV RRPCEVAVLI LAMAVCAYTG FLISALIRFP IINTSVLPAL
FIASGISAGA ASAKMLAVSM FKEEMHSQDM KLLHGAEWPI MAAEILFIFM IAMSLFTGNA
GMQSAFSAFH IGDWAGVFWL GVVGVGFCGP LLLNFATSKR VSHSAQAFYA SGVCAVTGMM
CLRLFIIYAG QNFAI
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