| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0487 |
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| Symbol | |
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| ID | 5613357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 600656 |
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| End bp | 601603 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931332 |
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| Product | polysulphide reductase, NrfD |
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| Protein accession | YP_001472228 |
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| Protein GI | 157373628 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3301] Formate-dependent nitrite reductase, membrane component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGGTA GTATTGAATT TACCATGGGG CTATCTCAAG GGATCGCCTG GCCTTGGCCG
ATTGCTGTTT ACCTGTTTTT TGCCGGGATC TCTGGTGGTG CACTGTCTGT TGCACTATTT
ATCCGATTCT ATAAGCAGCA AACGGAGAAT ACAGCATTTC TAAAAGCGGC ATCTTTAATG
TCGCTGGTAA CGATATCACT CGGGATGTTA TGTCTGGTAT TGGATTTGAC TAATCCGTTG
TTTTTCTGGC GAATACTTGT CTTCTATAAC CTTAACTCTG TCATGTCTAT TGGTGTGATT
GCGTTATCGG CTTATATACC GTTAGTTGCC CTCGTGACGC TGTTTGCACT CGAAGATGAG
ATCAGGAAGT TTCCAGCGTT GCGCTTCCTG TTGCCTGTCA TCGCAAAGTT GCGTGGAGTG
CGTGCCCCAT CGGAGAAGGT GGTACTGCTG CTAGCCCTGT CAGTGTGTGC CTATACCGGC
TTCCTGATCT CGGCTCTGAT CCGCTTCCCG ATTATTAACA CCTCAGTATT GCCGGCACTC
TTTGTTGCAT CGGGACTTTC TGCTGGTGCT GCAGCGGCTA AAATGTTGGC TGTTGGCCTG
TTCAAAGAGG AGCTACACAG TAGTGATATG AAGGTTTTAC ATGGTATTGA GTGGCCAATT
ATGGCTGCCG AAATCCTGTT TATCTTTATG CTTGCTATGT CTCTGTTTAC AGGTAATGCC
GGTATGCAGA GTGCCTTTAC TGCTTTCCAT AGTGGTACTT GGGCGAGTGT CTTCTGGATT
GGCATTATCG GAATCGGCTT TGTCGGCCCA CTGCTCTTGA ACTTTGCTAC AAGTAAAGCA
TTTAGCCATT CGGCTAAGGC GCTTTATATG TCTGGTATGT GTGCGGTTGT CGGCATGATG
TGTCTGCGTC TGTTTATCAT CTACGCCGGT CAAAACCATG GCATCTAG
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| Protein sequence | MDGSIEFTMG LSQGIAWPWP IAVYLFFAGI SGGALSVALF IRFYKQQTEN TAFLKAASLM
SLVTISLGML CLVLDLTNPL FFWRILVFYN LNSVMSIGVI ALSAYIPLVA LVTLFALEDE
IRKFPALRFL LPVIAKLRGV RAPSEKVVLL LALSVCAYTG FLISALIRFP IINTSVLPAL
FVASGLSAGA AAAKMLAVGL FKEELHSSDM KVLHGIEWPI MAAEILFIFM LAMSLFTGNA
GMQSAFTAFH SGTWASVFWI GIIGIGFVGP LLLNFATSKA FSHSAKALYM SGMCAVVGMM
CLRLFIIYAG QNHGI
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