| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0486 |
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| Symbol | |
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| ID | 5613356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 599949 |
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| End bp | 600653 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931331 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001472227 |
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| Protein GI | 157373627 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.631661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGTGAAA ATTTAGAGAG GCGGAGGTTC CTAAAGTGTT TAGGAGCTAG CTCTTTGATT
ATTGCACCAC TAGGGTGTAG CTCTGTCGAA GAGGAGGGGG AGAGTGATCA GCCCCACTAC
ACTATGGTGT TCGACCAAAA TAAGTGTACT GGCTGCGGTG AGTGTAAGCT TGCCTGTACC
ACTGCAAATA ATCTACCCGA AGGTAAGTCA CGACTCCTGC TTGAGCAGCA GTCGGGTGGC
GTAGTGGGTG AAGTATGCCC ACATTGTGGA AAAACCGATT GTGACTGTCA GCGCAAATAT
GTGCGAGTTT CTTGTCAGCA GTGTAAAAAC GCACCTTGTG TCACTGTATG TCCAACAGGT
GCTGCGCATC GTGATGAGAA AACAGGCATC GTCACTATGG ACGCCAGTAA GTGTGCAGGT
TGTAAATACT GTATCGGAGC TTGTCCATAC GATGCTCGTT TTATCAATAA AGAGACTGAT
GTTGCTGATA ACTGTGATTT TTGTTTGAAC TCAAAACTGT CTAAAGGTGA ACTCCCTGCC
TGTGTTCAAG CTTGTCGGTA CGATGCACTG ATTTTTGGTG ATCTCAATGA TCCAAACTCC
TATGTAAGTA AGTTGCTCAG AGTGAAAGAT GCAGTTCGAA TGAAGCCAGG CTTCGGAACT
GAACCTAGTT TGCGCTACAT ACCCATAGTT AAGTTAGGAG TGTAA
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| Protein sequence | MSENLERRRF LKCLGASSLI IAPLGCSSVE EEGESDQPHY TMVFDQNKCT GCGECKLACT
TANNLPEGKS RLLLEQQSGG VVGEVCPHCG KTDCDCQRKY VRVSCQQCKN APCVTVCPTG
AAHRDEKTGI VTMDASKCAG CKYCIGACPY DARFINKETD VADNCDFCLN SKLSKGELPA
CVQACRYDAL IFGDLNDPNS YVSKLLRVKD AVRMKPGFGT EPSLRYIPIV KLGV
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