| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0479 |
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| Symbol | |
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| ID | 5612933 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 592264 |
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| End bp | 592854 |
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| Gene Length | 591 bp |
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| Protein Length | 196 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931324 |
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| Product | thioredoxin, putative |
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| Protein accession | YP_001472220 |
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| Protein GI | 157373620 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0526] Thiol-disulfide isomerase and thioredoxins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAACTC CTATGAATAA GACACTTATA TTAACCTGCC TATTGGCCTT ATCCTCTGTA
TTCATCCCTG CAGACGCTAA GTCCAATAAA GTCTACAACA CCGGGGAGGC CATCAATAAG
CCGATGATCA TGTCTCGTTT TATTGAGATG CAATCGGCCA GAGAGGTACC CGATGTCACC
TTTACCGATA CCGAAGGTGG TGAGATAAAC CTCAAACAAT ATAAAGGCAA GGTGGTAATG
GTCAACCTAT GGGCAACCTG GTGCGCCCCC TGCATTAAAG AGATCCCGCA GATGGAGAAT
ATCCGTCAGA CCAATATAGA CAAAGATCTG GTCGTACTGC CGATCTCCAT CGATGAAGAG
AGTGAAAAAG TTAAACCATT CCTGGCCCGT CATGGACTGT CCCACTATAA GACCTGGCTG
GATCCCAATA AAGATATCGA CCAGGTCATG CCGGCAGATG TTGTCCCCGC GACCTATGTG
TTCGACGGTT CAGGGAATCT CATCGGTTTT CTGAGGGGAT ATTTAGATTG GGGGGATAAA
GAGGTGCAAC CCTACCTGGA AAAACTTATC GCCAAATACG CTAAACGATA G
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| Protein sequence | MVTPMNKTLI LTCLLALSSV FIPADAKSNK VYNTGEAINK PMIMSRFIEM QSAREVPDVT
FTDTEGGEIN LKQYKGKVVM VNLWATWCAP CIKEIPQMEN IRQTNIDKDL VVLPISIDEE
SEKVKPFLAR HGLSHYKTWL DPNKDIDQVM PADVVPATYV FDGSGNLIGF LRGYLDWGDK
EVQPYLEKLI AKYAKR
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