| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0472 |
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| Symbol | |
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| ID | 5612337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 584339 |
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| End bp | 585871 |
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| Gene Length | 1533 bp |
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| Protein Length | 510 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640931317 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472213 |
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| Protein GI | 157373613 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4928] Predicted P-loop ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCCAG TAATAGATGA AGCTCAGTTA GCACGGATGG AACGCGCAAA GACGTTTGCG
AGCAAATATG AAGATTGGCA ACCAGAGTAC AACTGGGGAA ATTGCAAGAC TAACAGGCAA
GAGTATGGCA AATTTTTGTG CTCATTTCTG ACAAATAGCA AAGACGGTTT AGTTGTTAAT
CTTAATGGTT CTTGGGGAAC CGGTAAAACT CAACTACTTA GACGTTTATA TGTAGAACTT
GCTGAGCAAA ATCACCCTGT GGTGTATATC AATGCATGGG AAAGTGACTT TTGTAATGAT
GCTTTATCTG TTGTTAGTAG CGAGTTCTTG AATCAACTGG GTTTCATTTT TTCTAGTAAT
GCTGATAAGT CCATCACTGA GAAGTTTAAT GAGCTGAAAG ATGGTTTTGG TACTTGTATG
AAGCTCCTGA GTGGTGGAGC CTCTCTTGTT GGAGAGCCTG TAACAGCGGC AACAGCGAGT
GCAGCAGGTT CAGTTGTTGA TACCTTACCT AAAGCTGAGA GTAATTCAGT AGTAAGTAAT
AATGTTGAAT TAGTCGATAA GATATCCCAA GCTCACGCTA ATCGTGTATT GGCTATGCAA
GATATAAAAA AGCAGATAAC CGCTTTGTCA CTTTTGATGA ATGAAATTCA TGATTTAGAA
GCACCGATAG TTGTTTTGGT TGATGAACTT GATAGATGTA GGCCGATATA CGCGATTGAG
ATGCTAGAAG TGATTAAGCA TTTCTTTGAA GCAAAAGGTT GTGTATTTTT GGTCGCGACA
GATACAGAAG CATTGCAACA TTCTGTAAAT GCTGTGTATG GAGCTAAGTT TAATTCAGCA
TCTTATTTGA AGCGTTTTTT TGCCAGGAAA ATCGCGCTTT CAGAAATATC GTCTCTAAGG
TATTTGAAAT CAAAAGAATT TGATTTTGAA AAGTACAGTG AGTTAGGAAT TAGGTTGCAC
CCATTTACAA AAAACCAGAA CTATAACATT AAGTATATGG CAGCCGTTGC TAAGTTAATT
GGTTTTGAGT TGAGAGATAT TGATCAGGTT ATACAAAAGT TTTTTGCAAG TTTGGACTTT
ATCGCAAAAA CCAGAATGAA CCATAAATCA GACGTCATTA ATACCGTTGT ATTGTTTACT
GGTATAGCAG AACACCATAA CGGAATGACG TGTTTTTATA ATCGAGAAAG CAATGTGCAT
ATAGATTCTG AAATACGGTG TGTAGGAAAT GTTTTAGATG GGATTTCAGT GAATGACCTG
ATGCAGAGTC AGCTAAATGC CGTAGTTAAA GTGATGTCTA GAGAGGTACA TTCCGGTGGA
GGAAGTTCAA TAAGCCGGGG GGATAATAGT AATATTGAGT GTCTTAAGAT TCAATCATAT
AACTTTATTC GACATGCGAC TAAAAGGTAT GACGATTTTG TTTTTCATGA GGAGATGAGG
AGTCTCATTC AATTAAGTGA GTCCACGGTT GATAGGTACT GGCTTTGGGA TGATTACAAA
ATGCTCATTG AGTTATCAGG TCACATCGAG TGA
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| Protein sequence | MDPVIDEAQL ARMERAKTFA SKYEDWQPEY NWGNCKTNRQ EYGKFLCSFL TNSKDGLVVN
LNGSWGTGKT QLLRRLYVEL AEQNHPVVYI NAWESDFCND ALSVVSSEFL NQLGFIFSSN
ADKSITEKFN ELKDGFGTCM KLLSGGASLV GEPVTAATAS AAGSVVDTLP KAESNSVVSN
NVELVDKISQ AHANRVLAMQ DIKKQITALS LLMNEIHDLE APIVVLVDEL DRCRPIYAIE
MLEVIKHFFE AKGCVFLVAT DTEALQHSVN AVYGAKFNSA SYLKRFFARK IALSEISSLR
YLKSKEFDFE KYSELGIRLH PFTKNQNYNI KYMAAVAKLI GFELRDIDQV IQKFFASLDF
IAKTRMNHKS DVINTVVLFT GIAEHHNGMT CFYNRESNVH IDSEIRCVGN VLDGISVNDL
MQSQLNAVVK VMSREVHSGG GSSISRGDNS NIECLKIQSY NFIRHATKRY DDFVFHEEMR
SLIQLSESTV DRYWLWDDYK MLIELSGHIE
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