| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0464 |
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| Symbol | |
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| ID | 5612175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 574914 |
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| End bp | 575861 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931309 |
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| Product | band 7 protein |
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| Protein accession | YP_001472205 |
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| Protein GI | 157373605 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000987812 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTAT TTACAATTTT TGTCCTGTTT ATCTTTTTTA TTCTCTATAA GCTGTTGTTA
ATTGTCCCTA TGCGTGAGGT CAATGTGATC GAACGTCTGG GTAAATTTCG GGCCGTGCTT
AAGCCCGGTT TTCATTTTCT TATTCCCTTC TTCGACCGCG TGGCCTATAA GCATGAGATC
CGTGAGCAGG TGCTGGATGT GCCGCCACAG AGTTGTATCT CGAAAGATAA CACTCAGCTT
GAGGTCGATG GTTTAGTCTA TCTCAAGGTG ATGGATGGCA AGCTGGCGAG CTATGGTATC
GAAAATTACC GTCTCGCGGC GGTGAACCTG GCTCAAACAA CCATGCGTTC AGAAATAGGT
AAACTGTCCC TAAGTCAGAC CTTCTCTGAG AGAGACAGTC TCAATGAGTC GATCGTACGT
GAGATCGATA AAGCCTCAGA CCCATGGGGA ATTAAAGTAC TTCGCTATGA GATAAAGAAC
ATTACACCGT CTCGTAAGGT GATACACACC TTAGAAAAAC AGATGGAAGC CGAGCGGAGT
AAGCGCGCGG AGATCACCTT AGCGAATGCA GAGAAAGCTG CGATGATTAA CCTCTCTGAG
GGGGAGCGAC AAGAGGCGAT CAACATCTCC GAGGGACAGA AACTCAAACG CATCAACGAG
GCTAAAGGTA CGGCGCAAGA GATCAGTATT ATTGCTAAGG CGAAGGCAGA GGGGATGGAG
CTTGTCTCAA CCGCGCTGGC GTTAGACGGC GGACACGAAG CGATGAACAT GCAGCTTAAG
GAGCAGTTTA TCGGTCAGGT AGGCAAAATA CTCAATGAGG CCGAAATTTC CGTTGTTCCG
GCTGAGATGG CAAAGTTGGA AGGCTTCTTC GAAGGTATGG AGCAGGTGAC GCATGCTGTG
AGTAGCAGTT CTACAGGCTC AAATTCAGTG AAAGGAGGTC GCTCATGA
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| Protein sequence | MFVFTIFVLF IFFILYKLLL IVPMREVNVI ERLGKFRAVL KPGFHFLIPF FDRVAYKHEI
REQVLDVPPQ SCISKDNTQL EVDGLVYLKV MDGKLASYGI ENYRLAAVNL AQTTMRSEIG
KLSLSQTFSE RDSLNESIVR EIDKASDPWG IKVLRYEIKN ITPSRKVIHT LEKQMEAERS
KRAEITLANA EKAAMINLSE GERQEAINIS EGQKLKRINE AKGTAQEISI IAKAKAEGME
LVSTALALDG GHEAMNMQLK EQFIGQVGKI LNEAEISVVP AEMAKLEGFF EGMEQVTHAV
SSSSTGSNSV KGGRS
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