| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0447 |
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| Symbol | |
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| ID | 5612545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 557633 |
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| End bp | 559471 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931292 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472188 |
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| Protein GI | 157373588 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.476837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTAC TGAATAAGCG TTATCTGGCT TTGGTAGTGG CTGGAGCGAT GGGCTTAAGT
GCCTGTGGAA GTGATGGTAA AGATGGCGAA GATGGCACTA CGCCGCCACC GCCAACGGTA
GGGGGCTCTC AAGTCACCAA TGTTGAGATG CTGTCTCACA CCTTGGAAGA GGGACTGGTG
CGATTTGAGT TTGAGATCAC CAATGAAGAG GGAGTCTTAA TCACCGGGCT CGAGGAAGCC
AGCGCGGAAG TGGCGGCACT AACCGAGAAA GGTATCCAGC GTAGCCGTGA TGGCTCTGTG
GGTGGCAGTG CCAATGTCTC TACCGAAGGT GCCAGCCTCA CCATGACTCA AGATGGTCGC
TATGAGTTTA TCGCGCCCAT GGCTGCGGTA AATGCGGGTA CCGAAGGACT TATTCGTTTA
GCCGTTGGCG GTGGCGATAA TATCGCTAAG TCTCGTTATA TTGTGGTCGA TAAAACTGAA
AATATTCATA CGACATCGAC GGCGACCTGT CAGAGCTGCC ACGTGGACTT CTTAGCCTCC
TCAATTAAGC ATTCGAGTTA TACGGCAATA AATGCTGAAG GCGAAACTGA CTTGGTTGCC
GGGTGTATGG CATGTCATAA CCACGTCCCG CGCGATGTGG ATGATAGTGG TAGTTCATTG
AATACCGGCG GTTATGCTAA GAATAGCCTG CAGAAGATTG GTCATATCAA TCATCAGAAG
TTTGAGAAGG ATTTTGCTCC CTCTAACTGT TACACCTGTC ACGCAGAGCC TATAGAGACT
GTCTATTCAC AGCAGACATG TATTGATTGT CATGATACTG CGAATGTTGA AACTTCAAAT
TTAGCGGCGA CCTTCAATTC CTTCAATGAA GGTAGTGATA TGCGCTTGTT CCATAAGAAG
ATAGCCGAAA AGAAAGCGGT TCATGAAGAG CATAGCTTGG CCACATCTCA GGTTTACAAT
AATGAGTTAG GTGAGTTCTG TACCGATATC TCTCTGTTCA AGGGGGAGGA GCAGTTAGAT
CTGGAGGGCT TAACATCGGA CGGTACCATC TCTTATATCG GGGCTTATCT GCACGGCTAC
GAGAATGCGT CTATTGTTGG TCGCGCGGCT CGCTCTTATA GCGCAACCTT CGATGCTGCT
GGTTCTGCAA CATTATGTTT TTCATCTCTC GATGAACTGT TCCCTGAAAT CATCGCCAGC
TCACGTGTGA CCTTCAACTT CGGGGAAGAT GCGGGATATG ATGGTGTAAC GCTTCACGGT
TACTCTGATG CTCTATCCGG TACTGAATAT GCGCGTCGAC ACTCTGTCAC CGCCGACAGC
TGTACAACGT GTCATACCAA CGGTAGCAAC TACCACAAGA ACGGTAGCTA CAATGATGGT
GGCTTAGGTT GTGTCGCGTG CCATAACAAT GGCCAGGACC GCAACGCTAA GAGCTCTGCA
CCAGGTTTTG GTCCTATGGT CCACAGCATG CACTGGGGAG TCGGTAACAC GGCGACAGAT
CCCGATGGTG AAGCAAACTC GGCAGCTAAG TTAAATGCCG AAAACTGTGT CGCCTGCCAT
GCTGAAGGTA TCGATATCGA TGCTATCCCT AATCAATATA TCTTATCTAA AGCCTATAAC
GGCGGAGAGT CGGGTGTGAT GACCAGTCCG GTAACCGCTA ACTGCTTTGC TTGTCATAAT
GATGATTCGG CTAAGAATCA CATGCTTCAA CAAGGTGGCG AAATCAACGT TGAGAAGCTT
GAAGATTGGT ACACATTACC AACATCAGAA TCTTGTTCAA CTTGTCATGC CGAGGGGAAA
TCTTACGGTA TCGAGAAGTT CCATGTATTC GAACGTTAA
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| Protein sequence | MKVLNKRYLA LVVAGAMGLS ACGSDGKDGE DGTTPPPPTV GGSQVTNVEM LSHTLEEGLV
RFEFEITNEE GVLITGLEEA SAEVAALTEK GIQRSRDGSV GGSANVSTEG ASLTMTQDGR
YEFIAPMAAV NAGTEGLIRL AVGGGDNIAK SRYIVVDKTE NIHTTSTATC QSCHVDFLAS
SIKHSSYTAI NAEGETDLVA GCMACHNHVP RDVDDSGSSL NTGGYAKNSL QKIGHINHQK
FEKDFAPSNC YTCHAEPIET VYSQQTCIDC HDTANVETSN LAATFNSFNE GSDMRLFHKK
IAEKKAVHEE HSLATSQVYN NELGEFCTDI SLFKGEEQLD LEGLTSDGTI SYIGAYLHGY
ENASIVGRAA RSYSATFDAA GSATLCFSSL DELFPEIIAS SRVTFNFGED AGYDGVTLHG
YSDALSGTEY ARRHSVTADS CTTCHTNGSN YHKNGSYNDG GLGCVACHNN GQDRNAKSSA
PGFGPMVHSM HWGVGNTATD PDGEANSAAK LNAENCVACH AEGIDIDAIP NQYILSKAYN
GGESGVMTSP VTANCFACHN DDSAKNHMLQ QGGEINVEKL EDWYTLPTSE SCSTCHAEGK
SYGIEKFHVF ER
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