| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0443 |
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| Symbol | |
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| ID | 5613912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 551686 |
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| End bp | 552978 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931288 |
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| Product | phosphoribosylamine--glycine ligase |
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| Protein accession | YP_001472184 |
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| Protein GI | 157373584 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0151] Phosphoribosylamine-glycine ligase |
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| TIGRFAM ID | [TIGR00877] phosphoribosylamine--glycine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.201644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTAT TAGTCATAGG TGGCGGCGGT CGTGAACATG CATTGGCATG GAAAGCGGCG
CAGTCTGCAC AGGTCGAAAA AGTCTTTGTA GCCCCTGGTA ATGCTGGCAC ATCTCTGGAG
CCAAAATTAG AAAATGTGGC CATTAATGTA GAAGAGATCT CTGCATTAGT CGCCTTTGCG
CAAGAGAAAG CCATTGAGAT CACCATTGTC GGCCCTGAAG TCCCGTTGGC ACTCGGCGTT
GTCGATGCTT TCAATGAAGC GGGTTTGCCT ATTTTTGGCC CAACCCAAGG CGCGGCGCAG
CTGGAATCTT CTAAAGCCTT CACAAAAGAT TTCTTAGCCC GTCATAACAT TCCAACTGCA
GCCTATTCTA ATTTTACAGA AATCGCGCCG GCTAAAGCCT ATGTGACAGA AGTGACAGCC
ATGACAGGTT TCCCTATCGT GATTAAGGCC GATGGCCTTG CCGCAGGTAA AGGGGTGATC
ATTGCTGAAG ATCAGGCAGC AGCAGACGCG GCTATCGAAG ATATGTTGGC TGGCAATAAG
TTTGGCGAAG CCGGTTCTCG CGTCGTTATC GAAGAGTTTC TTAAAGGTGA AGAAGCCAGC
TTTATCGTCA TGGTCGATGG TAAAAACATT CTTGCTATGG CCACCAGCCA AGATCATAAA
GCCCGTGATA ACGGCGATCA TGGTCCTAAC ACCGGCGGCA TGGGTGCCTA TTCACCCGCT
CCGGTTGTCA CTCAAGCCGT ACATGACTGG ACAATCAATA ACGTCATCCG CCCAACGGTC
GATGGCATGG CAGCAGAAGG TAATGTCTAT ACCGGCTTCC TTTATGCGGG CTTGATGATC
GCTCCCGATG GCAGCGCTAA GGTATTAGAG TACAACTGCC GTTTCGGCGA CCCTGAAACT
CAGCCTATCA TGATGCGCCT GAAATCTGAC TTAGTTGAGC TTTGCCTGGC TGCCACCCGT
GGCGAATTGA ATAAGGTTAC GGCTGAATTC GATGAGCGCG CCGCCGTCGG TGTCGTGCTG
GCCGCCGGAG GGTACCCGGA AGCGTACCGC AAGCACGACG TTATCGATGG TTTAGATCTG
GGTAACAATA ACGCCAAGGT CTTCCATGCC GGTACCTGCA TGAAAGATGG CCACGTGGTG
ACCAACGGTG GTCGCGTACT ATGTGCTACC GCTCTGGGTA ATAATGTCAC AGAGGCACAA
CAAGCTGCAT ATGGACTCGT CGATAAGATC CACTGGGATG ATGTCTACTT CCGCACCGAT
ATCGCCTACC GCGCTATCTC ACGGGAGAGT TAA
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| Protein sequence | MNVLVIGGGG REHALAWKAA QSAQVEKVFV APGNAGTSLE PKLENVAINV EEISALVAFA
QEKAIEITIV GPEVPLALGV VDAFNEAGLP IFGPTQGAAQ LESSKAFTKD FLARHNIPTA
AYSNFTEIAP AKAYVTEVTA MTGFPIVIKA DGLAAGKGVI IAEDQAAADA AIEDMLAGNK
FGEAGSRVVI EEFLKGEEAS FIVMVDGKNI LAMATSQDHK ARDNGDHGPN TGGMGAYSPA
PVVTQAVHDW TINNVIRPTV DGMAAEGNVY TGFLYAGLMI APDGSAKVLE YNCRFGDPET
QPIMMRLKSD LVELCLAATR GELNKVTAEF DERAAVGVVL AAGGYPEAYR KHDVIDGLDL
GNNNAKVFHA GTCMKDGHVV TNGGRVLCAT ALGNNVTEAQ QAAYGLVDKI HWDDVYFRTD
IAYRAISRES
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