Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0422 |
Symbol | coaE |
ID | 5614111 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | - |
Start bp | 513808 |
End bp | 514413 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640931267 |
Product | dephospho-CoA kinase |
Protein accession | YP_001472163 |
Protein GI | 157373563 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0237] Dephospho-CoA kinase |
TIGRFAM ID | [TIGR00152] dephospho-CoA kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000341611 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAAAGT TTATAGTTGG CCTGACGGGC GGTATTGGTA GCGGGAAAAC AACCGTTGCC AATATGTTCG CCGAGTTAGG CGTTGAGCTT GTCGATGCAG ATATTATTGC TCGAGAGGTG GTCGAGGTTG GATCCAAAGG GCTAAATGAG ATTAGTGCTC ACTTTGGAAA CACAATACTA AACAAGGATA AAAGCCTAAA TAGGGCCACA CTCAGAGAGC TCATTTTTAG TCAGCCCGAT GAACGACAAT GGCTAAACGA TCTGATGCAC CCCATGATCA GGAGTAAGAT ACTAAAATGT ATTGAATCCA CCACTTCACC CTACGCTATT TTGGTTGCTC CCTTGCTATT TGAGAATGGT TTAGATAGGT TAGTAAACTT ATCTCTTCTG GTTGATATTT CACCTGAACA GCAATTGGAC AGAACAATTG ATAGAGATTC TGTTTCTTCA GAACAAATTA AAAACATAAT AGATAGTCAG GCTCCCAGAG CTGAAAGACT ATCGAAGGCT GATGATGTCA TAGACAATCA TGGAAAGATA TCGGCACTAA AAGGGAAGGT CATTACACTA CATAATAATT ATTTGAAATT AGCCAATAAT ACTTAA
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Protein sequence | MSKFIVGLTG GIGSGKTTVA NMFAELGVEL VDADIIAREV VEVGSKGLNE ISAHFGNTIL NKDKSLNRAT LRELIFSQPD ERQWLNDLMH PMIRSKILKC IESTTSPYAI LVAPLLFENG LDRLVNLSLL VDISPEQQLD RTIDRDSVSS EQIKNIIDSQ APRAERLSKA DDVIDNHGKI SALKGKVITL HNNYLKLANN T
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