Gene Ssed_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0422 
SymbolcoaE 
ID5614111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp513808 
End bp514413 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content40% 
IMG OID640931267 
Productdephospho-CoA kinase 
Protein accessionYP_001472163 
Protein GI157373563 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0237] Dephospho-CoA kinase 
TIGRFAM ID[TIGR00152] dephospho-CoA kinase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000341611 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAAAGT TTATAGTTGG CCTGACGGGC GGTATTGGTA GCGGGAAAAC AACCGTTGCC 
AATATGTTCG CCGAGTTAGG CGTTGAGCTT GTCGATGCAG ATATTATTGC TCGAGAGGTG
GTCGAGGTTG GATCCAAAGG GCTAAATGAG ATTAGTGCTC ACTTTGGAAA CACAATACTA
AACAAGGATA AAAGCCTAAA TAGGGCCACA CTCAGAGAGC TCATTTTTAG TCAGCCCGAT
GAACGACAAT GGCTAAACGA TCTGATGCAC CCCATGATCA GGAGTAAGAT ACTAAAATGT
ATTGAATCCA CCACTTCACC CTACGCTATT TTGGTTGCTC CCTTGCTATT TGAGAATGGT
TTAGATAGGT TAGTAAACTT ATCTCTTCTG GTTGATATTT CACCTGAACA GCAATTGGAC
AGAACAATTG ATAGAGATTC TGTTTCTTCA GAACAAATTA AAAACATAAT AGATAGTCAG
GCTCCCAGAG CTGAAAGACT ATCGAAGGCT GATGATGTCA TAGACAATCA TGGAAAGATA
TCGGCACTAA AAGGGAAGGT CATTACACTA CATAATAATT ATTTGAAATT AGCCAATAAT
ACTTAA
 
Protein sequence
MSKFIVGLTG GIGSGKTTVA NMFAELGVEL VDADIIAREV VEVGSKGLNE ISAHFGNTIL 
NKDKSLNRAT LRELIFSQPD ERQWLNDLMH PMIRSKILKC IESTTSPYAI LVAPLLFENG
LDRLVNLSLL VDISPEQQLD RTIDRDSVSS EQIKNIIDSQ APRAERLSKA DDVIDNHGKI
SALKGKVITL HNNYLKLANN T