| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0421 |
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| Symbol | |
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| ID | 5614110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 513065 |
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| End bp | 513799 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640931266 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472162 |
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| Protein GI | 157373562 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4582] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000381369 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTGAAC TAATTTATGA ACAGCCTTTA AATGAAAAAA CAAGAAGCTA TTTGCGACTA
GAATATCTAG AACAGCAACT ACAAACAAAT TTAGCTCATG ATCATCAGCA TAGATGTTTC
TATCCACTTT TTTCTCTGTG CGAATTAACC GAACGCTGTG ATTATCGTGG CGAAGTATTA
AAAGATATTG ATAAACAGAT CCTTCAACTC TCTAACTGGC AAAACCTACC TCATATTGAC
TCTAGGCAAG TTAGTATTTA CTTGTCCAAA CTTGCGGATG CAAGAGAAGC CCTAAGTGTT
TGTGAGAGGC CAGGAAGCCA GCTTAAACTC AATCGCTTTC TTGCTGCATT ACGCCAAAGA
TTTAATATGC CGGGCGCTTG CTGTAACTTT GACCTTCCTC AACTCCACTA CTGGCTTGCA
AAACCATGGG ACATTCGCCA GTATGAATAC TCTGAGTGGA TTGGTCATTT TACCGCCTTG
CTCGTCCCCA TTAAGTTACT GCTGGACCTA ACCAGACAAA CCACCGAATA TAGCAATGCA
GTAGCCACAG CTGGTTTTTT TCAAGGAAAC AGCAATCAAG CCTTATCCTT AATCAGAGTC
AAACTAGACT CCCAACAAGG ATGCTATCCT ACAATCAGCG GTCATAAAAA TCGTTACGCC
ATCCATTTTG TACAATTTGA CCAACAGAAA CATTCTGATA GAAGCATAGA ATTCAAATTA
GCCACCTGTT CTTAA
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| Protein sequence | MTELIYEQPL NEKTRSYLRL EYLEQQLQTN LAHDHQHRCF YPLFSLCELT ERCDYRGEVL
KDIDKQILQL SNWQNLPHID SRQVSIYLSK LADAREALSV CERPGSQLKL NRFLAALRQR
FNMPGACCNF DLPQLHYWLA KPWDIRQYEY SEWIGHFTAL LVPIKLLLDL TRQTTEYSNA
VATAGFFQGN SNQALSLIRV KLDSQQGCYP TISGHKNRYA IHFVQFDQQK HSDRSIEFKL
ATCS
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