| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0420 |
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| Symbol | |
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| ID | 5614109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 512773 |
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| End bp | 512985 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640931265 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472161 |
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| Protein GI | 157373561 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3024] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000290938 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACAACAA CAGTGAAATG TCCAACCTGC CAAAAAGAAG TCATTTGGAA CAGCGAGTCT
AAATTTAAGC CTTTCTGTAG CGATAGATGT AAACTTATTG ACTTGGGAGA TTGGGCCTCA
GAAAAGCATG CAATTCCAGT TAAGTCCGAA TTTGATCCTG AAACCCTAGA TGGCTTAGGC
TACGATGAAG CTGACTTCTT TAAGGATCAA TAA
|
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| Protein sequence | MTTTVKCPTC QKEVIWNSES KFKPFCSDRC KLIDLGDWAS EKHAIPVKSE FDPETLDGLG
YDEADFFKDQ
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