Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0414 |
Symbol | |
ID | 5613656 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 484228 |
End bp | 485403 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640931246 |
Product | cell division protein FtsZ |
Protein accession | YP_001472155 |
Protein GI | 157373555 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0206] Cell division GTPase |
TIGRFAM ID | [TIGR00065] cell division protein FtsZ |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000271858 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00156987 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTTTGAGA TCATGGATAG TCATACTGAT GAAGCGGTGA TTAAGGTCAT CGGTGTCGGT GGCGGTGGTG GCAATGCCAT CGAACATATG GTTAAACACA ACATCGAAGG TGTTGAGTTT GTTGCAACCA ATACAGATGC ACAAGCATTA AGAAAATCTT CAGCAGGATC AACCATTCAA CTTGGACGTG ATATCACTAA AGGGTTGGGA GCGGGGGCAA ACCCAGAAAT TGGTCGCCTG GCAGCCGAGG AAGATAAAGA AAATATCAGA AATGCCATTA AAGGTTCTGA CATGATCTTT ATTGCCGCGG GTATGGGTGG CGGTACGGGT ACAGGTGCTG CGCCAGTTGT TGCTGAAGTT GCTAAAGAAG AAGGCATCTT AACCGTTGCC GTAGTAACTA AGCCTTTCCC GTTCGAGGGA AAGAAGCGCA TGTCTTATGC CGATCAAGGT ATCGCTGAGC TTGCCAAGCA TGTGGATTCG TTAATTACCA TTCCTAACGA GAAACTACTG AAAGTATTAG GCCGTGGTAC GTCATTGTTA GATGCTTTTG CCGCGGCAAA TAACGTATTG CTGGGTGCTG TTCAAGGTAT CGCAGAACTG ATCACTCGAC CTGGTCTGAT CAACGTGGAT TTCGCCGACG TGAAAACTGT GATGTCAGAG ATGGGTAATG CCATGATGGG TACGGGTGTA GCCAGTGGTG AAGACCGTGC CGAAGAAGCA GCCGAAGCGG CTGTTGCCAG TCCTTTGCTG GAAGATATCG ATCTTGCCGG GGCTCGTGGT GTACTTGTTA ACATTACGGC CGGTATGGAC ATGAGCATTG AAGAGTTTGA GACAGTGGGT AATCACGTTA AAGCTTATGC ATCTGATAAT GCTACAGTCG TCGTGGGAGC GGTAATCGAT CCTGAAATGA GCGATGAGTT GCGTGTGACC GTAGTTGCTA CCGGAATTGG TGCAGAAAAG AAGCCTGATA TTCAGTTGGT GACTAAACCT GCTCCGCGTC CAGAGCCAAT AGTGACACCA GAAGTTCGTC CAGAGACAGC ATCTGAAGAG ATGATAGCTC AGCCAATGGT GACAGGAAAT GTTGTGCCAG TTGCTCAAAC TGCACCAGCA CCAGCACCAA AAAATGAAGC AGATTATCTG GATATCCCAG CATTCTTGCG TAAGCAGGCT GATTAA
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Protein sequence | MFEIMDSHTD EAVIKVIGVG GGGGNAIEHM VKHNIEGVEF VATNTDAQAL RKSSAGSTIQ LGRDITKGLG AGANPEIGRL AAEEDKENIR NAIKGSDMIF IAAGMGGGTG TGAAPVVAEV AKEEGILTVA VVTKPFPFEG KKRMSYADQG IAELAKHVDS LITIPNEKLL KVLGRGTSLL DAFAAANNVL LGAVQGIAEL ITRPGLINVD FADVKTVMSE MGNAMMGTGV ASGEDRAEEA AEAAVASPLL EDIDLAGARG VLVNITAGMD MSIEEFETVG NHVKAYASDN ATVVVGAVID PEMSDELRVT VVATGIGAEK KPDIQLVTKP APRPEPIVTP EVRPETASEE MIAQPMVTGN VVPVAQTAPA PAPKNEADYL DIPAFLRKQA D
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