Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0413 |
Symbol | |
ID | 5613655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 482916 |
End bp | 484151 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640931245 |
Product | cell division protein FtsA |
Protein accession | YP_001472154 |
Protein GI | 157373554 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG0849] Actin-like ATPase involved in cell division |
TIGRFAM ID | [TIGR01174] cell division protein FtsA |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00909742 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00170264 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCAAGA ATCAAGATAG AAATCTGATC GTTGGATTAG ACATAGGAAC CTCAAAGGTT GCTGTGATCA TAGGTGAAGT GCTACCCGAT GGTGAGATCA GTGTTGTCGG GTTAGGGAAT CATCAGTCCA GAGGCATGGA CAAAGGTGGT GTAAACGATC TTGATTCTAT TGTGCGCAGT GTACAGCGTG CGTTAGATCA GGCCGAGTTA ATGGCCGATT GCCAAGTTTC ATCAGTATAT TTGGGTATTT CTGGTAAGCA TATAGATTGT CAGAATGAAA ACGGCATGGT CTCAATCAAT GATGAAGAGG TCACGCAGGA TGACGTCGAC AATGTGATTC ACACGGCGCG TTCGGTAAAA ATTCCTACTG AGCGCCGCAT ATTGCACGTG TTGCCACAAG AATATGCAAT CGATGTACAG GACGGCATTA AGAGCCCTAT CGGTATGTCA GGTATGCGTA TGGAGGCAAA GGTTCATATT GTTACATGCG CGAATGATAT GGCAAAAAAT ATTACCAAGA GTGTCGAGCG ATGTGGACTC AAGGTCGATG ACTTAGTGTT TTCTGCCATT GCATCTGCTG ACTCAGTTTT GACTAATGAT GAGAAGGACT TAGGTGTCTG TCTAGTCGAC ATCGGTGGTG GGACAACAGA TCTGGCGGTA TATACCAACG GTGCATTGCG TCATTGCGCT GTGGTGCCAG TTGCCGGTAA TCAGGTGACT AACGATATCG CGAAGATTTT CAGAACGCCA CTTTCTCATG CGGAACAGAT TAAGGTTCAA TTTGCCAGTG CTCGTAGCGC CATGGTTAGC CGTGAAGACA GTATTGAAGT TCCTTCTGTC GGTGGAAGGC CGTCCAGAAC CATGTCCAGA CATACTTTGG CAGAAGTGGT TGAGCCTAGG TATCAAGAGC TTTTTGAATT AGTACTGAAA GAATTAAGAG ACTCTGGTCT AGAAGACCAG ATCGCAGCTG GTATCGTCCT AACAGGTGGA ACATCCTCCA TTGAAGGGAC GGTTGATGTG GCTGAAGCCA CATTTGGTAT GCCAGTGAGA GTAGCAACAC CACTACCTGT GAAAGGGTTA TTTGAATATG TGGATCAGCC CATATATTCG ACCGGGGTAG GCTTGTTACA CTATGGAGCA AGAAGGGTCG TCGAGCGTCA GTTTGAGCGT CCTGAGCGTC AAGGGGTTAC CAGTCTTTGG AATCGGGTTC AAAGCTGGTT TAAAGGTGAG TTTTAA
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Protein sequence | MTKNQDRNLI VGLDIGTSKV AVIIGEVLPD GEISVVGLGN HQSRGMDKGG VNDLDSIVRS VQRALDQAEL MADCQVSSVY LGISGKHIDC QNENGMVSIN DEEVTQDDVD NVIHTARSVK IPTERRILHV LPQEYAIDVQ DGIKSPIGMS GMRMEAKVHI VTCANDMAKN ITKSVERCGL KVDDLVFSAI ASADSVLTND EKDLGVCLVD IGGGTTDLAV YTNGALRHCA VVPVAGNQVT NDIAKIFRTP LSHAEQIKVQ FASARSAMVS REDSIEVPSV GGRPSRTMSR HTLAEVVEPR YQELFELVLK ELRDSGLEDQ IAAGIVLTGG TSSIEGTVDV AEATFGMPVR VATPLPVKGL FEYVDQPIYS TGVGLLHYGA RRVVERQFER PERQGVTSLW NRVQSWFKGE F
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