Gene Ssed_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_0403 
Symbol 
ID5612163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp470784 
End bp471098 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content48% 
IMG OID640931235 
Productcell division protein FtsL 
Protein accessionYP_001472144 
Protein GI157373544 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG3116] Cell division protein 
TIGRFAM ID[TIGR02209] cell division protein FtsL 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000133126 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAGTAAAT CTCAATTGAA TCTGCCTCGA ATCGTTTTAC TCGACTTGTG GCATCACAAG 
TGGGTGTTGT TACTCGCAAT AGCCGTAATG GTGAATGCCA TTGCTGTTGT ATACACAAGC
CACGTGAGCC GCAAGTACAT CACTCAGTGG GATCAGATGC TGCAAGAGCG GGATAGGTTG
GACATTGAAT GGCGTAATTT ACTTCTTGAG GAGCAGTCTC AGTCTGAGCA CAGCCGGATC
ACGCGTATTG CGAGCAAAGA GCTCGAGATG AGCCGGCCAC TGCCTAAAGA AGAGATTGTG
GTAAGAGTGC CATGA
 
Protein sequence
MSKSQLNLPR IVLLDLWHHK WVLLLAIAVM VNAIAVVYTS HVSRKYITQW DQMLQERDRL 
DIEWRNLLLE EQSQSEHSRI TRIASKELEM SRPLPKEEIV VRVP