| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0388 |
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| Symbol | |
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| ID | 5612749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 451913 |
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| End bp | 453232 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931220 |
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| Product | N-acetylglutamate synthase |
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| Protein accession | YP_001472129 |
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| Protein GI | 157373529 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0548] Acetylglutamate kinase
[COG1246] N-acetylglutamate synthase and related acetyltransferases |
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| TIGRFAM ID | [TIGR01890] amino-acid N-acetyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0404545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000000193555 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGCGTACCA CTGAACTCGT TGATGGATTT CGTCATTCTG CCTCATACGT TAACTCTCAC
CGGGGTAAGA CTTTTGTCGT GATGTTAGGC GGTGAGGCCT TGGCCCAAAA TCAATTTCGC
TCGATTATCA ACGATATTGC CTTGCTGCAT AGTTTAGGTA TTAAGATTGT TCTGGTGCAT
GGTGCCAGAC CACAGATCGA TGAAGCGCTG GCTGATAAGT GCATCGTCCC TGAATATTAT
AATGGGGTGC GGATCACCGA AGAGGATGCT TTCAAGGTTA TCAAGCAGGT TGTGGGTGGC
CTTCAACTCG ATATTACAGC AAGGCTTTCC ATGAGCTTGA GTAATACGCC CATGCAAGGT
GCTCAAATTA ATGTGGTCAG TGGTAATTTC GTTATTGCTC AGCCCTTAGG CGTCGATGAT
GGCGTGGATT ATTGCCTCAG TGGCAAAGTA AGACGAATCG ATGTTCAGGG TCTTAAGGCT
CAGTTAGGCA ATAATGGCAT AGTGTTACTT GGTCCGATCG CGGCGTCGGT AACGGGGGAG
AGCTTTAATT TAACTGCGGA AGAGGTCGCG ACTCAAATTG CGGTCAAACT GAAGGCCGAC
AAGATGATAG GCTTCAGCTC TCAGAAAGGT ATTCTGGATA GTTTTGGTGA GGTGTTGGCC
GAGTTAATGC CAAACGAAGC CCAGCAGATC CTCAATAATC TTAATCAGGA ATCTCATGTC
TGCTTGGGGA CAAAGGCATT TCTAAAAGCC AGTATCGATG CCTGTCGAAA TGGCGTATCC
CGTTGTCACT TTGTCAGCTA TCTCGATGAT GGCTCCCTGC TTCAGGAGTT GTTCTCCAGA
GATGGTGTGG GTACGCAAAT CGTTACCGAG AGTGCAGAAC GTCTGCGCCG TGCGGGCATT
GGTGATATTG GTGGCATTTT AGACCTGATC CGTCCGTTAG AGGAGAAAGG AATATTAGTG
CGCCGCTCAC GTGAACAACT GGAGATGGAG ATCGAACAGT TTATGTTGAT TGAGCGTGAT
AGCTTAGTAA TAGGCTGCGC CGCCTTCTAT CCGTTTGAAG AGGATAATGC CGGTGAATTT
GCTTGTCTGG TCGTGCACCC TGAGTATCGC GATGCGGATA GAGGAAGTAT TTTACTCAAC
AATATCATTG GGCAGGCGAG GGTTAGGGGC TACTCACGAC TCTTTGCATT GACGACCAGA
AGCATTCATT GGTTTTTAGA GCATGGCTTC GAAATCGTTG AGGTCGATGA GTTACCGGAT
AAAAAGAAGC AGTTATACAA TTATCAGAGA AAGTCTAAAA TACTGGCTCT TGAGCTATAA
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| Protein sequence | MRTTELVDGF RHSASYVNSH RGKTFVVMLG GEALAQNQFR SIINDIALLH SLGIKIVLVH
GARPQIDEAL ADKCIVPEYY NGVRITEEDA FKVIKQVVGG LQLDITARLS MSLSNTPMQG
AQINVVSGNF VIAQPLGVDD GVDYCLSGKV RRIDVQGLKA QLGNNGIVLL GPIAASVTGE
SFNLTAEEVA TQIAVKLKAD KMIGFSSQKG ILDSFGEVLA ELMPNEAQQI LNNLNQESHV
CLGTKAFLKA SIDACRNGVS RCHFVSYLDD GSLLQELFSR DGVGTQIVTE SAERLRRAGI
GDIGGILDLI RPLEEKGILV RRSREQLEME IEQFMLIERD SLVIGCAAFY PFEEDNAGEF
ACLVVHPEYR DADRGSILLN NIIGQARVRG YSRLFALTTR SIHWFLEHGF EIVEVDELPD
KKKQLYNYQR KSKILALEL
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