| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0382 |
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| Symbol | slmA |
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| ID | 5612975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 447863 |
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| End bp | 448456 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931214 |
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| Product | nucleoid occlusion protein |
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| Protein accession | YP_001472123 |
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| Protein GI | 157373523 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000135011 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000636307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGGCTGTAA GCCCAAAAAT CAATCGCCGC GAACATATCC TCCAATGTCT GGCAACTATG
CTGGAAACCA ATCCGGGACA GAGAATAACA ACGGCAAAAC TCGCTGCCGA AGTGGGCGTC
TCTGAAGCCG CGTTATATCG ACACTTTCCA AGTAAAGCGC GCATGTTTGA AGGCCTTATC
GACTTCATCG AAGAATCACT CTTATCTCGC ATCAACCTCA TCATGACGGA AGAGAAAGAC
ACCATGAAGC GATGCCAGTT GCTACTGCAG CTTCTGCTTA TCTTCTCCGA ACGCAATCCT
GGGATCTCCA GGGTGCTAAA TGGTGACGCC CTGCTTGGTG AGAATGAACG TCTTCGTAGC
AGAGTCAGTC TTATTTTTTC AAAAATTGAA ACTCACCTAA AACAGATCTT ACGAGAGAAA
ACTCTGAGAG AGGGCAAAGG CTTTAATCTT GATGAAGCCA TTTTGGCCAA CCTGCTACTC
GCCATAGCAG AGGGTAGAAT CGCGCAATTT GTTCGCAGTG AATTTAAGCA AAAACCGACC
GAGCACTTCG ACCAACAGTG GATATTTATT CAGCAGCAGT TACTTCAAAG CTAG
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| Protein sequence | MAVSPKINRR EHILQCLATM LETNPGQRIT TAKLAAEVGV SEAALYRHFP SKARMFEGLI
DFIEESLLSR INLIMTEEKD TMKRCQLLLQ LLLIFSERNP GISRVLNGDA LLGENERLRS
RVSLIFSKIE THLKQILREK TLREGKGFNL DEAILANLLL AIAEGRIAQF VRSEFKQKPT
EHFDQQWIFI QQQLLQS
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