| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0380 |
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| Symbol | folE |
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| ID | 5612973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 444582 |
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| End bp | 445241 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931212 |
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| Product | GTP cyclohydrolase I |
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| Protein accession | YP_001472121 |
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| Protein GI | 157373521 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0302] GTP cyclohydrolase I |
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| TIGRFAM ID | [TIGR00063] GTP cyclohydrolase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000683928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGACATCAA AAGACGCCGT TCTCAGTGAA TCAGCACAGC TTGTGCAAAG TGCATTATTA
ACACGTGGAC TCGAGACTCC TATGCTCCCA AGTGAGCTTA GCGCCGATGA GCGTAAAGAC
CAGATTGAAC AGCATATGCG TGCAATCTTA AATTTAATGT CGCTGGATCT GACCGATGAC
AGCTTGGCCG ATACACCACG CCGTATAGCC AAAATGTATG TCGATGAAAT TTTCTCAGGT
CTGGATTATC AGAATTTCCC CAAGATCACT GTCATCGAAA ATAAGATGGG ATTCGATGAG
ATGATCAAGG TTAACGATAT CAGCCTGACG AGTACCTGCG AACACCACTT GGTCACCATT
GATGGTTTAG CCACCGTGGC TTATCTGCCA AGAAAAAACA TCATAGGCCT GTCTAAGATC
AATCGTATCG TGCAATTCTT CGCACAACGT CCTCAGGTGC AGGAGCGACT CACTCAACAA
GTTTTAGTCG CATTGCAGAC CCTGCTAGAG ACCAAAGATG TCGCAGTAAA GATGGATGCC
GTACATTATT GTGTGAAATC CCGTGGCGTC ATGGACTCCA CCAGCTCAAC GACAACTACG
GCACTGGGTG GCATTTTCAA ATCGAACCCA GCCACACGCG CCGAATTCTT AAGTAATTAA
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| Protein sequence | MTSKDAVLSE SAQLVQSALL TRGLETPMLP SELSADERKD QIEQHMRAIL NLMSLDLTDD
SLADTPRRIA KMYVDEIFSG LDYQNFPKIT VIENKMGFDE MIKVNDISLT STCEHHLVTI
DGLATVAYLP RKNIIGLSKI NRIVQFFAQR PQVQERLTQQ VLVALQTLLE TKDVAVKMDA
VHYCVKSRGV MDSTSSTTTT ALGGIFKSNP ATRAEFLSN
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