| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0379 |
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| Symbol | pyrE |
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| ID | 5612972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 443641 |
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| End bp | 444282 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931211 |
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| Product | orotate phosphoribosyltransferase |
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| Protein accession | YP_001472120 |
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| Protein GI | 157373520 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0461] Orotate phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000579905 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | GTGAAAGCTT ATCAGCGTGA GTTTATTGAG TTTGCATTAG AGCGTCAGGT ATTGAGATTT
GGCGAGTTTA CGCTTAAATC TGGCCGTACG AGTCCTTATT TTTTCAATGC AGGCCTGTTT
AACACAGGCC GTGACCTAGC TCGCCTCGGG CGTTTCTATG CCGCTGCGTT AGTCGATTCG
GGGATCAAAC ACGATCTTCT GTTTGGACCT GCGTACAAGG GGATCCCAAT TGCTACCACT
ACGGCCGTCG CTTTATGTGA GCATCATGAT ATCGATATCC CTTACTGCTT TAACCGTAAA
GAGAAGAAAG ATCACGGCGA AGGCGGCAGC TTAGTCGGCA GTGAGCTTAA AGGCCGCGTT
ATGTTGGTGG ATGATGTGAT CACTGCCGGT ACCGCGATTC GTGAGTCTAT GGAGATCATC
GAAGCCCATA AGGCTGAGCT GGCAGGTGTG TTGATCGCAC TGGATCGTCA GGAGAAGGGC
AAGGGTGAGC TTTCTGCTAT CCAGGAGGTC GAGCGTGACT TTGGCTGTGA AATTGTTTCT
ATCATCAAGT TGGGTGATTT GATTAACTAT CTTTCTGAAA AGTCAGGAAT GGAAGCGCAG
CTCGAGTCGG TGAGTGCTTA CCGCGACCAG TACGGAATTT AA
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| Protein sequence | MKAYQREFIE FALERQVLRF GEFTLKSGRT SPYFFNAGLF NTGRDLARLG RFYAAALVDS
GIKHDLLFGP AYKGIPIATT TAVALCEHHD IDIPYCFNRK EKKDHGEGGS LVGSELKGRV
MLVDDVITAG TAIRESMEII EAHKAELAGV LIALDRQEKG KGELSAIQEV ERDFGCEIVS
IIKLGDLINY LSEKSGMEAQ LESVSAYRDQ YGI
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