| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0377 |
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| Symbol | |
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| ID | 5613262 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 441797 |
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| End bp | 442660 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931209 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472118 |
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| Protein GI | 157373518 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1561] Uncharacterized stress-induced protein |
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| TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000623436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGATCCAAA GTATGACAGC CTATGCTCGT ATCGAGCACA AAGCCGAGTG GGGTACCGCC
TCTTGGGAAA TTCGTTCCGT CAATCAGCGC TATTTAGAAA CCTACCTGCG CCTACCCGAA
CATTTTCGCA ATCTGGAGCC AGTACTAAGA GACCGTCTGC GTAAACGTTT AAACCGTGGC
AAGATTGAAG TTAACCTAAG ATATGACCTC GCCGACAATA GCAGTAATGA ACTGCAGATC
AACCAAGATC TAGCTAAGCA GCTGATTAAT GCTGCTAACT GGGTAAAAGA GGAAGCCGGT
CAGGGTGAAC TGAACCTGGT CGATATCTTA AAGTGGCCGG GCGTCATGTC AGGCTCTGAG
CAAGATATGG ATGCATTGGG CAAAGAGCTG TTAGTTGCTT TCGATTCGGC AATCGATCAA
TTCATCGAAG CACGTGGCCG TGAGGGTGCA GCAATCAACA CCATGCTACA AACACGCCTC
GATGCCATCG TTGAGCAAGT CACTATCGTT CGCGAACATA TGCCTACCGT TATGCAGTGG
CAACGTGACA AGTTGATTAA TCGTTTAGCC GAGATCACTG GCGAGCTCGA TCCGGCTCGT
ATGGAGCAAG AGATGGTTAT TCTTGCTCAG AAGATGGATG TCGCCGAAGA GATGGACAGG
CTCGATGCCC ATGTTGCCGA GACACAACGT ATCCTTAAGA AAGGTGGCGC ACAGGGCCGC
CGTTTAGACT TTATGATGCA AGAGTTTAAC CGCGAATCTA ACACCTTAGC CTCTAAGTCT
ATCAGCGCCG AAGTCACTGC CGCCGCAGTA GAGCTTAAGG TGTTAATCGA GCAGATGCGT
GAACAGATCC AAAACGTAGA ATAA
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| Protein sequence | MIQSMTAYAR IEHKAEWGTA SWEIRSVNQR YLETYLRLPE HFRNLEPVLR DRLRKRLNRG
KIEVNLRYDL ADNSSNELQI NQDLAKQLIN AANWVKEEAG QGELNLVDIL KWPGVMSGSE
QDMDALGKEL LVAFDSAIDQ FIEARGREGA AINTMLQTRL DAIVEQVTIV REHMPTVMQW
QRDKLINRLA EITGELDPAR MEQEMVILAQ KMDVAEEMDR LDAHVAETQR ILKKGGAQGR
RLDFMMQEFN RESNTLASKS ISAEVTAAAV ELKVLIEQMR EQIQNVE
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