| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0374 |
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| Symbol | |
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| ID | 5613034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 439043 |
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| End bp | 439681 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640931206 |
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| Product | ERCC4 domain-containing protein |
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| Protein accession | YP_001472115 |
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| Protein GI | 157373515 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1948] ERCC4-type nuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000467735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAATAAGA CTCTAATTGA GATCGCCTAT GACGATAGGG AGCACGCGGA GATATTGATC
GAACAGCTGT CACTCCACAC AGAACTGTGC CTGGTCAGAA AACGTCTGAA GCTCGGCGAT
TATCAAATAA ACAACTGGCT TATAGAAAGA AAAACTCTGC CTGATCTCGT ATTTTCTCTC
TGTAACGGTC GACTGTTTTC ACAGATCGCG CGATTATCAA AGTGTTCAGA CAATGCAGCA
CTGCTTATCG AAGGTTCCTC TAAAGATATT GCATCTTATG ACATTACTCG AGAAGCATTA
ATTGGTGCAC TGTGCTCTAT TTCAATTAAC TTCAACATTC CCATCCTACG CAGTTTATCT
CAGTATGAAT CGGCTAAAAT TCTCTACTTT TGTGCCACGC AATTAAACAG TAGAGAAACA
GGATTAAAAC TCAACGGAAG AAAACCGAAA CGTAGGAAAA ACCGTCAGCT TTTCATACTA
CAAAGCCTAC CTGAAGTAGG TCCCCGATTA GCAAGGCGAT TATTAAAGCA CTTTGATAGC
GTCGAAGCCG TGATCACGGC ATCAACAGAT GAACTCATCA AAGTCGAGGG TATCGGACAA
GAGAGGGCAC GAAAAATACG CGAAATGTTA ATCCCATAA
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| Protein sequence | MNKTLIEIAY DDREHAEILI EQLSLHTELC LVRKRLKLGD YQINNWLIER KTLPDLVFSL
CNGRLFSQIA RLSKCSDNAA LLIEGSSKDI ASYDITREAL IGALCSISIN FNIPILRSLS
QYESAKILYF CATQLNSRET GLKLNGRKPK RRKNRQLFIL QSLPEVGPRL ARRLLKHFDS
VEAVITASTD ELIKVEGIGQ ERARKIREML IP
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