| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0370 |
|---|
| Symbol | |
|---|
| ID | 5613270 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 433077 |
|---|
| End bp | 434120 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640931202 |
|---|
| Product | phosphate transporter |
|---|
| Protein accession | YP_001472111 |
|---|
| Protein GI | 157373511 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0306] Phosphate/sulphate permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000205571 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000000000610826 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGGATATTG CTATTTGGAT TTTCCTCTCC AGCGGTCTGT TTCTGGGGTG GTCGTTAGGC
GCGAATGATG CCGCGAATGT GTTCGGCACC GCCGTTGGAA CAAGAATGGT TAAGTTTTCG
ACGGCCGCAC TTATCTGTTC AGTTATGGTG ATCTTAGGCG CTGTAATTAG CGGCGCGGGT
GCATCACATA CATTAGGCGC TTTAGGCAAA GTATCTGCTT TAGGTGGTGC CTTTACTGTT
GCCCTGTCGG CTGCAACAAC TGTTTATTTC ATGACTAAAT CCGGGCTTCC TGTCTCTACG
GGTCAAGCGA TTGTAGGCGC TATTATTGGC TGGAACCTAT TCAGTGGTAT GGCAACCGAT
CCTAAGGTGT TGAGTAAAAT CCTCAGTACC TGGATCATGT GTCCTATCTT AGCTGCATTC
ACCGCTGTGC TGCTATATAA GCTGGTTGCA GCATCGATAA ACTGGTTTCG TCCCGGCTTG
TTTCAATTGG ATAAATGGAC TCGAATCGGC TTGATCATTG CGGGGGCATT TGGTTCGTAC
AGCCTGGGGG CAAACAATAT TGCCAATGTC ATGGGGGTAT TCGTACTGAG TGCACCTATC
GACTCTGCAA TATGGATGGG AATTGAGTTC AGTCCCGCTA TGCAGCTGTT TTTTATCGGT
TCTGTTGCCA TTAGTATAGG TGTTTTTACC TATTCCAAAA AAGTGATGCT CACCGTAGGA
GATAACTTGA TCCCTATGAC GCCGATAACA GCCTGGGTTG TTGTGATGGC CCATTCAATT
GTTCTGTTTA TTTTCTCTTC GCAATCTTTG TCCAATAGTT TTGTTGAGCT GGGATTGCCG
GCGATACCTT TAGTACCGGT ATCCAGCTCT CAGGCTGTAA TTGGTGCGGT CATTGGTATT
GCATTGTTGA AGCGCTTACC TATTAGGTGG GCGGTGTTAT CACAAATATT GATGGGCTGG
GTTATTACTC CAATAATATC TGCCTTGGCA TGTTTTATTG GTCTGTTTAT AGTTCAAAAC
CTATTTAATC AGGTCGTAGT TTGA
|
|---|
| Protein sequence | MDIAIWIFLS SGLFLGWSLG ANDAANVFGT AVGTRMVKFS TAALICSVMV ILGAVISGAG
ASHTLGALGK VSALGGAFTV ALSAATTVYF MTKSGLPVST GQAIVGAIIG WNLFSGMATD
PKVLSKILST WIMCPILAAF TAVLLYKLVA ASINWFRPGL FQLDKWTRIG LIIAGAFGSY
SLGANNIANV MGVFVLSAPI DSAIWMGIEF SPAMQLFFIG SVAISIGVFT YSKKVMLTVG
DNLIPMTPIT AWVVVMAHSI VLFIFSSQSL SNSFVELGLP AIPLVPVSSS QAVIGAVIGI
ALLKRLPIRW AVLSQILMGW VITPIISALA CFIGLFIVQN LFNQVVV
|
|---|
| |