| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0363 |
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| Symbol | |
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| ID | 5612052 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 425452 |
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| End bp | 427050 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931195 |
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| Product | sodium/sulphate symporter |
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| Protein accession | YP_001472104 |
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| Protein GI | 157373504 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | [TIGR00785] anion transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.288684 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000731788 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACAAAA AAAAAGCACA TGTCGATCCA TTAGACATGA ACCAGTATCG AATGGAAAAA
CTACCGATAC GGAGTAAGAG CAAGTTTGAG CAATGGTTGG AAAAATCGGG TATCTGGATT
GCTATTGCCG CATTTATCTA TCTCCTCGTC GGTGAGCCTT CTACATTCCT TACCAGCTTC
GATCCATCGA CTCTCAGTGC CACCGCCTCT AAGCACTTTC TTAACGTGGG TAATGTTGAA
TTTAGCTGGC ATGGTCAAGC CATGCTCGCC ATTTTTTGCG CCGCCATCAT CTTATGGATA
ACGGAAGCCA TTCCTAATTA TTTAACCTCG CTAATCGTTA TTATCACTAT GGTACTGACG
GGTGTTCTCC CGGAAAAAGT CGCTTACGCT CAGCTAGGCC ACCCTATTAT GTGGCTGAAT
ATTCTATCTT TTATATTGGC ATCTATGTTA GTTGCTTCCG GTGCGGCCAA ACGCTTCGCT
CTATGGTTCA TCTGCAGATT CGCGACCAGT GCCACACCAA TTTTTTATAG CTTTATGGTT
ATCAACTTAG TGTTGTCGGC GTTTATTTCG GCGACAACGG CTAAGGCCGC GATCTTGATG
CCAATCTTTA TGGTTATCGC TGCGGTGTAT GGCGCCTCAG GGGGAGACAA AAAGAACAAC
TTCGGCAGAA ATCTGGTGCT TCAAAATCTG CTGCAGATAA ATTTATGTGC AGGCGCATTT
GTCACAGGGT CCGGCGCAAA CTTGCTTGCA GCCAGTCTTA TTGCCGGCGC TATCGGTGGC
AGCTTCTTCT TTGCCGACTG GATGATCGTC GCCCTGCCTA TCGTCATATG CATGATTATC
GTGGGCTGGC TGTTAGCGAC AAAAGTCTTT TTCCCGCTCT CTCCTGAAGA ACATCTTCCC
CAAATTGAAG GCGGTATGGA TCGTCTGAAA AAAGAGCTGG ATAAGATGGG CACCATCTCG
ACCAGAGAGA TAAAAGCAAT CGTCATCTTT GTCACTATCC TGGTATTTTG GGCCACGGAT
AAACACCATG GCATCAGCGC AACCGCCATT GCCTTTATCG GTGCCATTGT CGCCCTCTCC
CCACGCATCG GCGTAGTCAA CTGGAACCAG GTCGATGTCC CATGGCATCT ACTTCTGTTC
TCGGCGGGTG CATATACGCT TGGTGCCGGC TTTAAACAGA CGGATCTGCC TAATCTTGCG
GTAAATTTCG GTTTAGAATA TTTTGGCCTG GGTGACAACA CGCCCTTTTC GGTCTTCTAT
ATAGGTCTCA CCGGAGCCAT GTTGTTCAGC TCACTCGTCT TTCAATCAAA GACAATGCGA
ACCATGTTAT TCGTTCCCAT TGCGATAGGT ATTGCACAAA GATTTAACTA TCCGATTATG
AGTCTGGCAC TGCCTGTTGC ACTGCTTATC GAGCATGTCT ACGTGCTGCC TTTTAACAGT
AAGCCCGCGC TACTACTCTA CTCTACGGAT CAATACAGCC TGAGTGACAC CTTCAAGTTC
GGTATCACTA TGCTAATCAT TGGCTGGATC GGCAGCATCG TCTTAGGCGA AACCTGGTTT
CATTGGTTAG GTTACACACC TAATGGCGTG TTCTGGTAG
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| Protein sequence | MNKKKAHVDP LDMNQYRMEK LPIRSKSKFE QWLEKSGIWI AIAAFIYLLV GEPSTFLTSF
DPSTLSATAS KHFLNVGNVE FSWHGQAMLA IFCAAIILWI TEAIPNYLTS LIVIITMVLT
GVLPEKVAYA QLGHPIMWLN ILSFILASML VASGAAKRFA LWFICRFATS ATPIFYSFMV
INLVLSAFIS ATTAKAAILM PIFMVIAAVY GASGGDKKNN FGRNLVLQNL LQINLCAGAF
VTGSGANLLA ASLIAGAIGG SFFFADWMIV ALPIVICMII VGWLLATKVF FPLSPEEHLP
QIEGGMDRLK KELDKMGTIS TREIKAIVIF VTILVFWATD KHHGISATAI AFIGAIVALS
PRIGVVNWNQ VDVPWHLLLF SAGAYTLGAG FKQTDLPNLA VNFGLEYFGL GDNTPFSVFY
IGLTGAMLFS SLVFQSKTMR TMLFVPIAIG IAQRFNYPIM SLALPVALLI EHVYVLPFNS
KPALLLYSTD QYSLSDTFKF GITMLIIGWI GSIVLGETWF HWLGYTPNGV FW
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