| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0360 |
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| Symbol | |
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| ID | 5613331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 421242 |
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| End bp | 422939 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931192 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472101 |
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| Protein GI | 157373501 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03509] decaheme-associated outer membrane protein, MtrB/PioB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0310928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00101277 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGGCTA AACTTACTTT AGTAGCACTC GCTGTTCTCT CAGTCAATGC TACCGCAGCG
AACTTCGCTG TACCGCAAGA TATTGAAAAA GACTATGCCT GTAAGCGTTG TGTCGCCACC
GAACACGCTA ACACCGTCGG CATCATAACC GAACAACGTA GTCACTTAGA CACTCAGTAC
GGCGCTAGCG CCGATATTAA AGGTGCCAAC TACAGCATAA ATGCAGTCGA GGCCGGCGCT
GATAATGGTC ATCTAAAAGC CGCAGCACAC CTGGGCGATT TCGCACTGGA GCTGGCTTAT
GTTAACCGCT GGAACCTCGA CGATAACGAT ATCGGCGCCG AGCGTCAGCA GTTATCGGTC
GGGGCAAAGT ACCAGACTCA ACTTGTCACC GCGTTTGTTA AAGCAAGTAG TGAAGACAAG
CAGGGTCAGC GTATCGGCTC TGTGGTTGAC CCTAAGCCGA CTAACTATCT AGAGACTATA
GATCACACGA CTCAGGTGAT GAACGCCGGC CTGCAACTTC ATGGAGATTT TTGGAACCTA
GGTGTTGCCG CCTTTAACTC GGAGTTTACC GACAATGCCG GTATCGATGC CGATAACAGC
GCTCAACAAG CCAGTGTAAA AGCGGGTCTT AACTACGGCA GCACACGCCT AAGTGTTAGC
GCAGCTTCCG GCAAGATGAT TCAGGACGAG GCTATCGAGC AGGAAAACTC GCTGGTGCCT
ATCTCAAACT TCGATGGTGA AGTTGAGACA CTAGACTACA GTGCCCGTAT CAGCTCTCGC
GTTGCAGGGT TCAAGGTAAC TGGTTTCTAC AGCTACAGTG ACCGCGACAA TGTCAGCGGC
TCATATGAAT TTTTTGAATC TATCAACACG CCAATCGATA GCAGCAAGAC ACGTTTAGGT
GTCGATGCCA GCTACCGTTT AGGCAGCACT AAGTTCAGTG CAGGTTTCGA GCAGAATGAC
CGAACCCGCA CCGACAGCGA CCGTGAGGAG ACCCAAGAGA GTGAGGTCTT TGGCCGTATA
GACTACCGTT ATCAACAGTT TAACTCCCAT ATTAAATTCA TCAGCGGTGA ACGTACGGGC
TCTGAGTACC ATATCGGTGA CGATATCTAC CAGAAGTACT ATCTGGCGGA CAGAGACCGT
GTCAGTACTG AGCTGGGACT GGGTTACAGC CAAAATCACT ACGGTGCCAA CCTTAAAGTC
AGTATCGCCA GTGATGAGTA CAGCAACAGC TCGGCACTGA AAGAATCTGA CGAGATGTCG
GTTAACGTCG ACGGCTTCTA TCGTTTCAAC GACCAGATGG TGCTCAACGC CTATGCTGGT
ACACAGACCA TCGATAGCCT GGAGATCCAC AACACCACGG TTAGTGATGA GTTTACCTAC
TTCGGTTTTG GTTTAGACCA GTACCAAATC AATGAGGATA TAGCGCTAGG CACCTCCTAC
ACCTTCTCAT TATCTGGCAG TGACACCGCC GTAGACAGCA CAGAAATGGG GGACTATTAC
CAATACCAAC ACCTTGCTGA AATCCATATG GATTACCGCA TAAGTGAGCG TATTTCGACC
CGTTTTGCTT ACAGCTATGA GCGCAACTAC GACACGAACT ACGCCAACCA ACCGATTGAT
GCCATCAATA CCATTGACGA CCTCAATCAA AACTACACCG ACCACAAGAT CGGTGCATTT
TTCACAATTA AGCTGTAA
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| Protein sequence | MKAKLTLVAL AVLSVNATAA NFAVPQDIEK DYACKRCVAT EHANTVGIIT EQRSHLDTQY
GASADIKGAN YSINAVEAGA DNGHLKAAAH LGDFALELAY VNRWNLDDND IGAERQQLSV
GAKYQTQLVT AFVKASSEDK QGQRIGSVVD PKPTNYLETI DHTTQVMNAG LQLHGDFWNL
GVAAFNSEFT DNAGIDADNS AQQASVKAGL NYGSTRLSVS AASGKMIQDE AIEQENSLVP
ISNFDGEVET LDYSARISSR VAGFKVTGFY SYSDRDNVSG SYEFFESINT PIDSSKTRLG
VDASYRLGST KFSAGFEQND RTRTDSDREE TQESEVFGRI DYRYQQFNSH IKFISGERTG
SEYHIGDDIY QKYYLADRDR VSTELGLGYS QNHYGANLKV SIASDEYSNS SALKESDEMS
VNVDGFYRFN DQMVLNAYAG TQTIDSLEIH NTTVSDEFTY FGFGLDQYQI NEDIALGTSY
TFSLSGSDTA VDSTEMGDYY QYQHLAEIHM DYRISERIST RFAYSYERNY DTNYANQPID
AINTIDDLNQ NYTDHKIGAF FTIKL
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