| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0357 |
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| Symbol | |
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| ID | 5612638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 416026 |
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| End bp | 418128 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931189 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472098 |
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| Protein GI | 157373498 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000745858 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00573689 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATACTA AACTTTCTCT TGTAGCAGTC CTTTTAGCAG GTGCTATGGT AACTGGCTGT
TCTGATGATG ATTCAGAAAC AGTCTATGTC TGTGAAAATG GCGATACCGT TTCTGCTCCA
GAGCAGTGCC CTACAACACC AACAGATCCT ACAGATCCAG TTGAACCGCC AGCTGTAGAC
GGTCCATTCG TACATGCTGG TCGTACTATT ATCGATGGCG CCTTTTACAG TGCCACCAGC
CCTAGTAACG AGTACGACCC ACTGCGTGAC TGGGAAAATA CAATGCCAGC TGGCTATAAA
GAGATGCGTA ATGCCTCTTA CCCTTGGGGA ACCACTGTTT ATAATTCAGC AGCCAATGGC
GAAGAGTTAT GGATGGGTAC CATCTCGAAC GGGTGGTGTG TATGGCCGTA CCAGAATATA
GCCATGCCTA TCGAGTTGAC TACCTTTGAG AGTGAGACGA CAGGCTGCTC AGTTCCCGGT
ACTACCGGTA CTCCATCACA GATCTTCATC TACAACTTCC GTACCGGTGC AAAGGAAGTG
ATTCATGAGA GCATGCTGAC ATCAGGTGGT CCTCAGTTTA CTGAAGCGTT CAAGCCTATC
AATAATACCT ATGGCTTCCG CGCCGCGGGT ACTGCCGGTG ACCTAGTATT CGTCGCTGGA
CACTGGAAGA CTACAGAAGA TAAAGGTCGC CTACGTCTAT TCGTATTCAA TGCTAAGGAG
CGTTCATTCG TAGGCTACCG CGATATCGTA GGTGACACCA CTCGTCGCTT CCGTACTTTG
GAACATGCAG ACGGCACGAC AGGGTTCTAC ACTATCGTCG GTGCAGAAAC GGGTATGACT
CAATACGGTG ACGGCCCGAC ACAGCTACTT CGTTGGGTGG GTACTCAGGA CGATCCATTC
GCTGGCGGTA ATATCAAGGG TACAGACCCA CTGACGACTA CTGGCTGGAG CAAGGTTTCG
ACTCAACTGG ATAATGAACA GACTCCAGAC GGAGTACAGT ACGGTATGAT CGGTGACTGG
CGCCAATTCA CCCATACCGA CGGTACTGAG CGTCTGATCA TGTCAGCCTC AGCACATCCT
TTCGTGTACA AAAACGGCGT ACGTAGTGAT AAGTTTAAAG AGTCAGTCAT TCTGATCTCA
GATCCTATCC CTAACTCAGG CTACACAGTA GATGAGCAGC TTACTTTCCG TGAAGTATTC
GGTATGGATC AGTACGACCC TGACACTAAA GGTCGCTGGG GAGCTAAGTG GGGAACAAGT
GCTATTAACG ACGGCTACAT GTACTTCGGT ACTTACCACC AAGGTACAGA TGCTGCTTAT
AAGCACTTCG CTAAGGCAGA CCCTGCTCTA TTCACTGAGT TAACAGGTCT AGAGTCTGCC
GGAGAAGCTG ATGCGACTAA GGTAACCGAC GTTACTACAA CTAATGATGC TCAGGCTACT
GATCATAAAC TGTTTATGAT TAATGAATGG CGTGCTACCT CAATCTTCCG TATTGACCTT
AAAAATATCG ATGCGGTAAG CGCTGGCGAC ACCTCTAAGG TAGAGTTGCT ATACGGCTAC
GAGACTATGG AGGTTAACGA CGGTAACGGT TGGAAGACTA CACCAAACTT ACTAGGTAAG
AAGCCTACTC ATGGCGAAGC GGGTATGGGT AATCCAGGTA ACGTATATTC TTGGACCTCA
ATTGCAAAAG ACGGCAAGTT ATTCTGGGGA TTCTTCGATG CGTTCTCTGG ACTACATGAT
CTACTATTCG AAGCGTATTC CGGTGAGTAC ATGTTATTCG ACGGTATCGT ATTCCAGAAC
CCTGTGTGGA AGAGGCAAAT GGCTAATAAC CCAGCCATGT GGATGTACGA TTACGCTAAA
GCAGAGATGG ATGCTAACGG TCTAGGCGCA GAGTTTATTC CAGGTGGCGA TCTACTTATG
ATTGAAGCTG ATGGTTCTGC ACGTAAGCTT ACTACTAACG GTTTCGGTAA CCAGTGCTCT
AACGGTATCC GTAACGTTGT AGATATTGAT GACAAACTAT ACTTTGGTAC GTCAACTTGG
TGTAACGTCG GTCCTACCTC TGGGCTTGAG TTCTACCAAT ATGAGCCTAG CTTAGATAAG
TAG
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| Protein sequence | MNTKLSLVAV LLAGAMVTGC SDDDSETVYV CENGDTVSAP EQCPTTPTDP TDPVEPPAVD
GPFVHAGRTI IDGAFYSATS PSNEYDPLRD WENTMPAGYK EMRNASYPWG TTVYNSAANG
EELWMGTISN GWCVWPYQNI AMPIELTTFE SETTGCSVPG TTGTPSQIFI YNFRTGAKEV
IHESMLTSGG PQFTEAFKPI NNTYGFRAAG TAGDLVFVAG HWKTTEDKGR LRLFVFNAKE
RSFVGYRDIV GDTTRRFRTL EHADGTTGFY TIVGAETGMT QYGDGPTQLL RWVGTQDDPF
AGGNIKGTDP LTTTGWSKVS TQLDNEQTPD GVQYGMIGDW RQFTHTDGTE RLIMSASAHP
FVYKNGVRSD KFKESVILIS DPIPNSGYTV DEQLTFREVF GMDQYDPDTK GRWGAKWGTS
AINDGYMYFG TYHQGTDAAY KHFAKADPAL FTELTGLESA GEADATKVTD VTTTNDAQAT
DHKLFMINEW RATSIFRIDL KNIDAVSAGD TSKVELLYGY ETMEVNDGNG WKTTPNLLGK
KPTHGEAGMG NPGNVYSWTS IAKDGKLFWG FFDAFSGLHD LLFEAYSGEY MLFDGIVFQN
PVWKRQMANN PAMWMYDYAK AEMDANGLGA EFIPGGDLLM IEADGSARKL TTNGFGNQCS
NGIRNVVDID DKLYFGTSTW CNVGPTSGLE FYQYEPSLDK
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