| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0349 |
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| Symbol | |
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| ID | 5610810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 405205 |
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| End bp | 405840 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640931181 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001472090 |
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| Protein GI | 157373490 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR02951] DMSO reductase, iron-sulfur subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.302127 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCAATA ATATCCAATA CGGCTTTCAT GTCGACGCAA GCAAATGTAC CGGCTGTAAA
ACCTGTCAGG TATCGTGTAA GGATCGTAAA GACCTTCCTG TCGGCATCAA CTGGCGCCGG
GTCTATGAAT ACGGTGGCGG TCAATGGACA GAAAATGGTG ATGGCACAGT AAGCCAGAAC
GTATTCGCCT ACTACATGTC TATCGGTTGT AACCACTGTT CTGAGCCTGT GTGTGTTAAG
GCCTGTCCGA CTGGTGCAAT GCACAAACGC CGCGAAGATG GCTTAGTCCA TGTAGCTGCA
GATCTGTGTA TCGGTTGCGA AAGCTGTGCA AGAGCCTGTC CATACGATGC ACCTCAGATA
GACAAAGACC GTAAGGTGAT GACCAAGTGT GACGGTTGTT ATGAGCGTTT GGCCGAAGGA
AAGCAGCCTT CATGTGTCGA GTCTTGCCCT ATGCGTGCTA TCGACTTCGG TCCTATGGAC
GAGTTGAAGG CTAAGTACCC TGGAGCCATC TCACCCGATG TTGCTCCGCT GCCGGAAAGT
AGTGTAACGA CACCAAACTT ACTAATCACA CCTAACCGTC ACACTCGCCC AAGTGGCGCC
ACCGATGGAG AAGTGTTGAA CTACTCAGAA GTTTAA
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| Protein sequence | MSNNIQYGFH VDASKCTGCK TCQVSCKDRK DLPVGINWRR VYEYGGGQWT ENGDGTVSQN
VFAYYMSIGC NHCSEPVCVK ACPTGAMHKR REDGLVHVAA DLCIGCESCA RACPYDAPQI
DKDRKVMTKC DGCYERLAEG KQPSCVESCP MRAIDFGPMD ELKAKYPGAI SPDVAPLPES
SVTTPNLLIT PNRHTRPSGA TDGEVLNYSE V
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