| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0344 |
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| Symbol | |
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| ID | 5613895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 398611 |
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| End bp | 400170 |
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| Gene Length | 1560 bp |
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| Protein Length | 519 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640931176 |
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| Product | flavocytochrome c flavin subunit, putative |
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| Protein accession | YP_001472085 |
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| Protein GI | 157373485 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.892888 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA AACAACCAAT AAGCCTTCGC AGACGTCAGC TAATTACCGG AGGAGCAGCA
CTCGCCGTTA CCGGTCTGGG AGCCTCTCTG GCTAAACCTG TCAGTGCCGC ATGTGTGCCG
GCCGAAGAGG TCAAGTTTGA TGAAGTTGTC GACATCATAG TGGTAGGTAG CGGTTTTGCC
GGCATGTCGG CAGCATTGCA GGCCCGGGAA GCCGGAGCCA GCGTAATGGT GGTGGATAAG
ATGCCTGTCT TCGGTGGTAA CTCCACCATC AATGGCGGCG CCATGGCCGT GGCCGGCTCC
CCTCTACAGC AGCAAAACGG TATTAAGGAC TCGGTAGACA CTATGGTGGC CGACATGCTT
GAAGCGGGCC GTGGCATGAA TGATGTCGAG ATGCTCAAGC TGGTATGTAA TGGCACCGCC
GAGTCGTGCC AATGGCTGAC CGATTATGGC GTTAAGTGGA AACCCTTTGT GCAGCACTTT
GGTGGTCACT CTATTCCACG TGTGCTTCAA ACAGTCGAAA GCTCGGGGGC CGGTATCATT
CGCCCTCTGG TCAAGGCAGC CAAGAAACGC GGCATAGATA TGCGCACCCA GACCAAGCTG
GAGTCTTTTA TTGAGGATGA CCAGGGACGC GTAACGGGTA TCGAAGTTAA GGCCAACTAC
TTCTTCCCTA AAGAGCGCTC CGGTGTGACT CGCCGTTACG GTGCCCGCAA GGGGATCATC
ATGGCCACCG GCGGCTTCGG TCGTGACATC GAATATCGCA AGATGCAGCA ACCTAAACTC
ACCAAAGAGT TGGATTCCAC TAACCATCCG GGCGCCAATG CCGATGCGCT GAAGCAGATG
ATGCTGATCG GCGCCAACCC CATCCACCTG GATCAAATTC AGCTGGGCCC ATGGGCCTCT
CCAGATGAGA AAGGTTTTGG CACCGCATCA CAATTTAACA CCATCGCGAC CTACCCCAGA
GGCATAGTGG TCGATGCACG TACCGGTAAG CGTTTCTTTA ACGAACTGGC CGATCGTAAG
GCCCGCGCCG ACGCCATCAT GACCCGTCGT GACGCCCAGG GACAACCAGT TTATCCCATC
GGCTTTACCA ATGCCGAAGG CGCCAGCAAG GCTCAGACTC TGGATTGGGG ATTGAAATAT
AACGTCATCA AGAAGGCTGA CACGCTCGAA GAGCTGGCCA AGATCTATGG CATTCCCGCC
GATGCCCTCA AGGCACAGGT AGAGAGCTGG AACAAGGCCG TCGATACCGG CGAGGACAGC
GAGTTTGGCA GACCCATGCA GAAGGCGATG AAGCTGGAGC AAGGTCCCTG GTACGCCGTC
CGTATGTGGC CAAAGGTTCA TTACTGCATG GGTGGCGTCA AGGTAAATAC CCGCTCTGAG
GTGTTGCATC TGGTGACCTA CAAACCAATT GCAGGACTGT TCGCAGCGGG TGAAGCAACC
GGCGGTATCC ACGGCGCGAG TCGTCTCGGT GCCTGCGCCG TTGCTGAAGG TGTCGTCACA
GGCCGTAACG CCGGCCAAAT GTGTGCCGCA TCAAAAAGTA TTGTGTTGAA ACACGTATAA
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| Protein sequence | MSDKQPISLR RRQLITGGAA LAVTGLGASL AKPVSAACVP AEEVKFDEVV DIIVVGSGFA
GMSAALQARE AGASVMVVDK MPVFGGNSTI NGGAMAVAGS PLQQQNGIKD SVDTMVADML
EAGRGMNDVE MLKLVCNGTA ESCQWLTDYG VKWKPFVQHF GGHSIPRVLQ TVESSGAGII
RPLVKAAKKR GIDMRTQTKL ESFIEDDQGR VTGIEVKANY FFPKERSGVT RRYGARKGII
MATGGFGRDI EYRKMQQPKL TKELDSTNHP GANADALKQM MLIGANPIHL DQIQLGPWAS
PDEKGFGTAS QFNTIATYPR GIVVDARTGK RFFNELADRK ARADAIMTRR DAQGQPVYPI
GFTNAEGASK AQTLDWGLKY NVIKKADTLE ELAKIYGIPA DALKAQVESW NKAVDTGEDS
EFGRPMQKAM KLEQGPWYAV RMWPKVHYCM GGVKVNTRSE VLHLVTYKPI AGLFAAGEAT
GGIHGASRLG ACAVAEGVVT GRNAGQMCAA SKSIVLKHV
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