| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0336 |
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| Symbol | gmk |
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| ID | 5610920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 389500 |
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| End bp | 390123 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931168 |
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| Product | guanylate kinase |
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| Protein accession | YP_001472077 |
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| Protein GI | 157373477 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0194] Guanylate kinase |
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| TIGRFAM ID | [TIGR03263] guanylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.57704 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCAC GCGGAAACCT ATTTATCGTA TCGGCACCGA GTGGTGCGGG TAAGTCTTCA
CTGATATCGG CACTATTGAA AGATAAACCG ACTGACAAGC AAGTTTCTGT GTCTCATACC
ACGCGCCAGC CGCGCCCCGG TGAAGTGAAT GGCCAACACT ACCATTTTGT TACTGTCGAA
GAGTTCAAAG CATTAATTGA AGAAAACGCG TTTTTCGAGT GGGCCGAAGT GTTCGGTAAC
TACTATGGCA CATCGCGCAG AGTTATCGAG CAGACCCTTA ATGAAGGTAT CGATGTGTTT
CTCGATATCG ACTGGCAAGG GGCTCAGCAG GTTAAGAAAT TGATGCCTGA ATCCATAGGG
GTATTTATTT TACCGCCTTC GAGAGCCGAA TTAGAACGCC GCCTGGCGGG TCGAGGTCAG
GATAGCAATG AGATCATCGC AGGCCGTATG GCGCAAGCCG CATCAGAGAT CTCACATTAT
GCTGAATACG ACTTCATCAT TATTAACGAT GACTTCGATA CCGCCCTCGC CGATTTAATC
GCCATTATTC GCAGCCAACG CTTAACTGGT GCTGGCCAAA TTCATGCTCA AAATGATATG
ATTAAAGATC TGTTGGCAGA CTAG
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| Protein sequence | MTARGNLFIV SAPSGAGKSS LISALLKDKP TDKQVSVSHT TRQPRPGEVN GQHYHFVTVE
EFKALIEENA FFEWAEVFGN YYGTSRRVIE QTLNEGIDVF LDIDWQGAQQ VKKLMPESIG
VFILPPSRAE LERRLAGRGQ DSNEIIAGRM AQAASEISHY AEYDFIIIND DFDTALADLI
AIIRSQRLTG AGQIHAQNDM IKDLLAD
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