| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0328 |
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| Symbol | |
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| ID | 5610068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 379475 |
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| End bp | 380344 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931160 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472069 |
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| Protein GI | 157373469 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0161313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTTA GTCAAGAAGA TAGAATAGCA CCGCAAGAAA AGTCTGCCGG TGCCAATACC
ATAGCAATCG TGGCGCTTGC CGTTGTGGTA CTCATCTCCG GTGGAGCTTA TTACTATTTC
AGCGATACCG CAGAGTTACA ACCACAAGAG AGAGCCGCCG TTGAAATACC GGACGTGCTC
CCCGAAGAGC CTCTCGTCAC CATTGCCGAT ATCCCGGAGC CAGAGATAGA AGCTGTCGTC
GAACCGGTAA TAGAGGTGGT TGAGACCCCT CAACCAGAAA TTGAACCTCT GCCGACGTTG
GAAGAGAGTG ATAGTTTTGT TCATGACAAG ACGGTCGTGA TGGCCGACGG TATGGCGATT
GAGCCCATGC TGGTCGAAAA AGATCTCGTG AGACATTTTG TGGTGTTTGT CGATAACCTG
GCGCAGGGAG AACTCGCTCG CAAGGTCAGT CCGCTCAAGG GGCCTGAGAG AGTATTTACC
GTTTCAGAGA TCACCAATAA AACTTACCTT AACCCGGACA GCTACCACAG GTACGACCTT
TACGCCGATT TTGTTGCCAA CTTAAATGAG GTGCAACTTG CTGACACCTA TAAAGAGCTG
ACCCCGCTGT TATCTGAGGC ATTTGAGGAG TTAGGTTATG GTGATATGAG CTTTAATGAG
CGCATGCTGG AGGCCATCGA CATCATGCTG GCGGCGCCGA TTATTGAACA ACCCATAGAG
CTCGATGGTG TCAGCGTTAA CTATCAATTT GTCGATCCTC AACTTGAAGC CCTTCCTAAT
GCGCAAAAAT TATTAGTGAG AATGGGCCCT GAAAATAGCA AGAAGGTGAA AGCTGCGCTT
CGTAGACTAA AGAAGCATCT AGCTGATTAA
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| Protein sequence | MQVSQEDRIA PQEKSAGANT IAIVALAVVV LISGGAYYYF SDTAELQPQE RAAVEIPDVL
PEEPLVTIAD IPEPEIEAVV EPVIEVVETP QPEIEPLPTL EESDSFVHDK TVVMADGMAI
EPMLVEKDLV RHFVVFVDNL AQGELARKVS PLKGPERVFT VSEITNKTYL NPDSYHRYDL
YADFVANLNE VQLADTYKEL TPLLSEAFEE LGYGDMSFNE RMLEAIDIML AAPIIEQPIE
LDGVSVNYQF VDPQLEALPN AQKLLVRMGP ENSKKVKAAL RRLKKHLAD
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