| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0326 |
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| Symbol | |
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| ID | 5610066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 377730 |
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| End bp | 378521 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931158 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_001472067 |
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| Protein GI | 157373467 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | [TIGR00530] 1-acyl-sn-glycerol-3-phosphate acyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00811057 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGATAACG CTCCGGCAAA GAGACTCACC GGTATTGCCT ACATTCCCAG GTGGTTAGGA
GGCGTTAGCT GCTATATCGT TTTCGGGCTC GGCGGCCTGT TAACCTCGCT AACCATCTTA
CCTCTTCTCA GGTTTTGGCC GGGCACTAGA GAGCAAAGAG TTAGTCGGGT ACAAAAAGCC
GTACATATTA TGTTTCGGGG GTTCGTCCAT ATGCTCACCA GGGCTGGGGT CATAAAAGTC
ACCCCGGTTA ACATCACGCG ACTGAGCGAG GCGAGAGGCA AGGTGGTGAT CATGAATCAT
CCTACCCTGG TCGATGTCGT GGTATTGATA AGCTTAATGC CAAATGCCGG ATGCATCGTT
AAACAAGGTA TCTGGCGAAA CCCTTTTATG CGCGGCGTTG TGGCCTGCGC GGGTTATATA
CCTAACCGTG GTGCTGAATT ACTTCTACTT GATTGCAAGC AAGTGTTAGA CCGCGGGACT
AACTTAATCA TCTTCCCGGA AGGCACACGC ACAGTCCTTG GCACTGTTAT CAATGATTTT
GCCCGTGGTG CTGCCAATAT AGCACTGAGA ACCAAGACAG ATATTTTACC TGTCATTCTT
CATACCAATG CATCTGGCTT AACTAAGCAG GAAGCCTGGT ATGAAATCCC CCGTCGCACC
ATAGGGATGC GTGTTGAAGT AGGCGAAACT ATCGATCACA TCAGGTATGA TACACAAGCC
GGTGGCGATG CAAAAATGGC GCGTCTACTT ACACGGGATC TCGAAGATCA CTTTAAAAAA
GAACTTAAAT AA
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| Protein sequence | MDNAPAKRLT GIAYIPRWLG GVSCYIVFGL GGLLTSLTIL PLLRFWPGTR EQRVSRVQKA
VHIMFRGFVH MLTRAGVIKV TPVNITRLSE ARGKVVIMNH PTLVDVVVLI SLMPNAGCIV
KQGIWRNPFM RGVVACAGYI PNRGAELLLL DCKQVLDRGT NLIIFPEGTR TVLGTVINDF
ARGAANIALR TKTDILPVIL HTNASGLTKQ EAWYEIPRRT IGMRVEVGET IDHIRYDTQA
GGDAKMARLL TRDLEDHFKK ELK
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