| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0324 |
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| Symbol | |
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| ID | 5609590 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 377215 |
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| End bp | 377463 |
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| Gene Length | 249 bp |
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| Protein Length | 82 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640931156 |
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| Product | acyl carrier protein |
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| Protein accession | YP_001472065 |
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| Protein GI | 157373465 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0236] Acyl carrier protein |
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| TIGRFAM ID | [TIGR00517] acyl carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00657258 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCAAAGTC GTGAACAAAT TCTTGAAGCC TTGACTCAGA TCTTAGTCGA TGAGTTTGAA
ATCGAAGCCG AAGATATCAC CCTTGAAGCG TCTCTCTATC AAGAGTTAGA TCTGGACAGT
ATCGATGCCG TTGACTTAGT CATCAAGTTG CAGCAGATGA CAGGGAAGAA AATTAAGCCC
GAAGAGTTTA AAGCCGTACG GACCGTCGAT GACGTGGTTA CCGCCATCGA AGGGCTGACT
AAAGGCTGA
|
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| Protein sequence | MQSREQILEA LTQILVDEFE IEAEDITLEA SLYQELDLDS IDAVDLVIKL QQMTGKKIKP
EEFKAVRTVD DVVTAIEGLT KG
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