| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0323 |
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| Symbol | |
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| ID | 5609589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 376667 |
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| End bp | 377215 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640931155 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472064 |
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| Protein GI | 157373464 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4648] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00653194 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGCTTAT TTTTACAAAT AGTCACCAGT CTCTTATTGA TTGGCTATCC TTTAGCCGTT
TATTTTGGAC TCAACTATTT GCCGGCAGGC ACCATAGCCA TGGTACTTTG CCTGTTTTTA
ATTCTGCGGT TGCTGATACA AAAGCAACAG GTAAAGTCGA TGGTTTTGCC TGTATTGGTC
GGTATAGGAT TAACTGCCGG AAGTTTTATC GCAAAGAGGC ATGATTGGTT ACTTTACTAT
CCAGTGGTGA TTAACCTTAG CATGCTACTT TTGTTCGGCT ATTCGCTAAA ATCGGGACCG
AGTATGATTG AACGACTCGC CAGGTTGAAA GAACCTGATC TTCCCGATGA AGCGATACCT
TACTTACAAA AAGTCACGCT CATCTGGTGT GGCTTATTTG TTTTCAATGG CGTCGTAGCC
CTCTATACCG CTCGCTATTC CAGTTTGGAA ATATGGACGC TGTATAACGG ACTTATCGCC
TATCTGCTCA TAGGTTCGCT ACTTGGTGGC GAGTGGTTGT ATAGAACTAT TTGGTTAAAA
AAGTCATGA
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| Protein sequence | MRLFLQIVTS LLLIGYPLAV YFGLNYLPAG TIAMVLCLFL ILRLLIQKQQ VKSMVLPVLV
GIGLTAGSFI AKRHDWLLYY PVVINLSMLL LFGYSLKSGP SMIERLARLK EPDLPDEAIP
YLQKVTLIWC GLFVFNGVVA LYTARYSSLE IWTLYNGLIA YLLIGSLLGG EWLYRTIWLK
KS
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