| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0318 |
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| Symbol | |
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| ID | 5609718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 371194 |
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| End bp | 371673 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931150 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001472059 |
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| Protein GI | 157373459 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0824] Predicted thioesterase |
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| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00109584 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACTAAGC TATCGGGCAA AGCCATCTTA ACCATTGAGT TAGAGATGCT GATCCCATTT
CATGATGTCG ACTCCATGGG GATCACCTGG CATGGCAACT ATTTGCGTTA TTTCGAAATA
GCCCGTTGTC AGCTATTAGA TAAAATCCAA TACGGTTACC GGGAGATGCA AGCCTCAGGT
TACTCCTGGC CTATCGTCGA TCTACAGATA AAGTACGTTC AACCCAGCAC GTTTGAGCAA
AAGATTAAGG TTATCGCCTC ACTCGTCGAG TGGGAGAATC GTATCAAGAT CAACTATCAG
GTCAGGGATG TCGTCACTAA CCAACGACTC ACCAAGGGCT ACACAATACA AGCCGCCGTT
GAAACTGAAA CCAACGAGCT TTGCTTCGTG ACGCCCGATA TCTTCAGAGA AAAAATTGCC
CACCTGATAG AGAAGCACGC CTCCCAAAAC CCGGTAGTAT CTGAGGGAAG CGGCCGATGA
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| Protein sequence | MTKLSGKAIL TIELEMLIPF HDVDSMGITW HGNYLRYFEI ARCQLLDKIQ YGYREMQASG
YSWPIVDLQI KYVQPSTFEQ KIKVIASLVE WENRIKINYQ VRDVVTNQRL TKGYTIQAAV
ETETNELCFV TPDIFREKIA HLIEKHASQN PVVSEGSGR
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