| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0313 |
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| Symbol | |
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| ID | 5610048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 364784 |
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| End bp | 365989 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931145 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase I |
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| Protein accession | YP_001472054 |
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| Protein GI | 157373454 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000546627 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGA TAATGACTAA AATAGCCATC TCACACATAG GACTATGCAC TCCGTTAGGC
CAGAGCCCGG AACAGGTATT AGCCCGACTA GTTACAGGCG ATATCGGCGC GATGAAACTT
CGTGACGATC TCATCCCACA GAGCAACACC TTAGTGGGAG AGGTGAACCT GCCACTACCT
GAACTGCCTG ACTCTCTTAT GCAATTCTGT ACCCGCAATA ATCAGCTGTT ACTCTGCGCC
GCACAGCAGG TAGCAGACAG GGTCAAACAG GCTCGCGAGC AGTACGGTCC CGAGCGTATC
GGCATCATAT TAGGCACCAG CACTTCTGGT ATTGCTCAGG GCGAAGAAGC ATTAAAACAT
CGAGCCGAAC AAGACCTGCT TCCCTCTGAT TATCAGTACT CTCAGCAGGA ACTGGGGAAT
GGCAGTGACT TTTTACGCGA ATACTTTAAG ACCAGCGGGC CTTGTTATAC CGTTTCTACG
GCCTGCTCTT CGAGTGCCAA GGTATTTGCC AGTGCGAGAC GCTTACTGCA GGCAGATCTG
TGCGACCTGG TCATCGTCGG TGGTAGTGAC AGCCTTTGTA GATTAACTCT CAATGGTTTT
AACTCGTTAG AATCCGTTTC AAAGGGCCAG TGTCAGCCTT TTAGTGCCAG TAGAGATGGG
ATCAATATCG GTGAAGGGGC GGCATTGTTT ACCCTCGAAA GAGGCGATGC AGAAATCATG
TTAGCTGGCA TCGGCGAGTC CAGCGATGCC CATCATATTT CGGCGCCTCA TCCGGAAGGT
CGCGGTGCCA TATCGGCGAT ACGTGCGGCA ATCGATGATG CAGGGATCGG TGTCGATAAG
ATCAGCTATA TCAACCTTCA TGGTACCGCC ACCCAAAAGA ATGATGCCAT GGAGAGTCGT
GCCCTGCAGC AGGTATTTGG CAACAACATC CCTCCATGTA GCTCAACCAA GCCTCTGACC
GGACATACTT TAGGTGCAGC CGGTGCCATC GAGGCCGCAT TTTGTTGCCT GCTACTCACC
TCGCTCAATA CCGCACAGGC TCTCCCGCCA CAGGTTTGGG ATGGCAAACA AGACGCCAAC
GATCCCAGTT TACCTTTGGT CAACAAAGGA CAAACTGCAG ATCTTAACTA TATAATGAGT
AACTCATTTG CCTTTGGCGG CAGCAATGCC AGCCTGATAT TTTGCCGCAA AGAAGCATTA
TCATGA
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| Protein sequence | MKKIMTKIAI SHIGLCTPLG QSPEQVLARL VTGDIGAMKL RDDLIPQSNT LVGEVNLPLP
ELPDSLMQFC TRNNQLLLCA AQQVADRVKQ AREQYGPERI GIILGTSTSG IAQGEEALKH
RAEQDLLPSD YQYSQQELGN GSDFLREYFK TSGPCYTVST ACSSSAKVFA SARRLLQADL
CDLVIVGGSD SLCRLTLNGF NSLESVSKGQ CQPFSASRDG INIGEGAALF TLERGDAEIM
LAGIGESSDA HHISAPHPEG RGAISAIRAA IDDAGIGVDK ISYINLHGTA TQKNDAMESR
ALQQVFGNNI PPCSSTKPLT GHTLGAAGAI EAAFCCLLLT SLNTAQALPP QVWDGKQDAN
DPSLPLVNKG QTADLNYIMS NSFAFGGSNA SLIFCRKEAL S
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