| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0310 |
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| Symbol | |
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| ID | 5610002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 362282 |
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| End bp | 363529 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640931142 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase II |
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| Protein accession | YP_001472051 |
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| Protein GI | 157373451 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0145441 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000045333 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAGAC GAGTCGTCAT CACTGGCTGC GGCGGAATTT CCAGCCTGGG CCACGACTGG
CCAACCATCG CCGCTAATTT AAAGGCTCAG AAGAACTGTG TCGTGCGTTT CGATGAATGG
GATCGTTATA CCGGCCTAAA CACACGTTTA GCCGCCCCCG TAACTGACTT CGAAAAGCCG
GCTCATTACT CCCGGAAAAA GGTCCGCTCT ATGGGCCGGG TCTCACTGAT GGCGACCCGT
GCCAGCGAGC TCGCGCTTAT TGACGCAGGC CTGTTAGATG ATCCTATCGT GAGTTCCGGT
GCCATGGGCA TCGCCTATGG TTCCTCAACC GGTAGCACAG ATCCCATTAT CGCCTTTGGT
GACATGCTAA AGAATGGCGA TATGTCGGGT GTCACCGCCA CCAGTTATAT CCGTATGATG
GCTCATACCA CCGCGGTTAA TGTCGGCGTA TTCTTTGGCC TCAAGGGGCG TGTGCATACC
ACCAGTAGCG CCTGCACCTC CGGTAGCCAG GGAATAGGCT ACGCCTATGA AGCGATTAAG
TATGGCCAGC AAGAGTTAAT GCTTGCGGGT GGCGGTGAAG AGCTATGCGC CACCGAAGCC
GTGGTATTCG ATACCCTTTT TGCCACCAGC ACCAAGAATG ATACTCCCGA GCTCAGTCCC
AGCCCATTCG ACAAAGGCCG TGATGGTTTA GTCATAGGCG AAGGCGCCTG TACCTTAGTA
CTGGAGGAGC TCGAACATGC TCAGGCTCGC GGTGCAAAGA TCTATGCCGA AATAGTCGGC
TTTGGAACTA ACTCCGATGG TCTTCATGTG ACTCAGCCCA ATGCAGGTAC CATGGAGGTC
GCCATCAGGC AGGCTTTGAA AGACAGCCAA CTGTCACCCG ATGCCATTGG TTATGTGAAC
GCACACGGCA CGGCGACCGA TAGAGGCGAT ATTGCAGAGA CTCAGGCAAC CCACGCCGTC
TTCGGCGCAT CGATGCCTAT CTCATCACTC AAGAGTTATA CCGGTCATAC CTTAGGGGCT
TGCGGCGCAT TAGAAGCCTG GGTCACTGTA GAGATGATGA ATGCAGGCTG GTTTGCACCG
ACCCTGAACC TGACGGAGAT AGACCCCGAG TGCGGTGAGT TAGATTACAT TAAGAGTGAT
ATTCGACATA TAGATACAGA CTATGTGATG AGTAATAACT TCGCCTTCGG TGGCATCAAC
ACCTCCTTGA TATTTAAACG CTGGTCAGAC ACCAACTCAA CACAATAA
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| Protein sequence | MSRRVVITGC GGISSLGHDW PTIAANLKAQ KNCVVRFDEW DRYTGLNTRL AAPVTDFEKP
AHYSRKKVRS MGRVSLMATR ASELALIDAG LLDDPIVSSG AMGIAYGSST GSTDPIIAFG
DMLKNGDMSG VTATSYIRMM AHTTAVNVGV FFGLKGRVHT TSSACTSGSQ GIGYAYEAIK
YGQQELMLAG GGEELCATEA VVFDTLFATS TKNDTPELSP SPFDKGRDGL VIGEGACTLV
LEELEHAQAR GAKIYAEIVG FGTNSDGLHV TQPNAGTMEV AIRQALKDSQ LSPDAIGYVN
AHGTATDRGD IAETQATHAV FGASMPISSL KSYTGHTLGA CGALEAWVTV EMMNAGWFAP
TLNLTEIDPE CGELDYIKSD IRHIDTDYVM SNNFAFGGIN TSLIFKRWSD TNSTQ
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