| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0306 |
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| Symbol | |
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| ID | 5609867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 359652 |
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| End bp | 360125 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931138 |
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| Product | thioesterase domain-containing protein |
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| Protein accession | YP_001472047 |
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| Protein GI | 157373447 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02447] thioesterase domain, putative |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00971414 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000893128 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGACCGCTT CCGATGAGAG GGGTCAGCAG ATAGCTTCAC TCCTGAAGGA GCTGACTGAA
ACCTGGCATC AAACGATCCC CGTGAGTGAG TTTATGCAGA TATCCCCGCT TGGATATCAT
GATAATCGGC TGAAGGTCAC AGCCCCCCTA TCTCCTAATA TCAACTTACA TCAAACCATG
TTTGCCGGCA GCATCTATAC CCTGGCAACT TTGACGGGCT GGGGGATGCT GTGGCTGCAG
CAAAGGCTGG CAGAGGTTAA CGGCGATATT GTGTTGGCCG ACGGCCATAT TCGTTACTTA
GCCCCGATTT CAGGGGCACC AACAGCAAAG GTAAGCTGGC CGGATGTTGA TCTTTCTCGA
TTGACTCTAG GACGTCGGGT TAAGGTGAAA TTGGTGGTGG AAATATACGT CGGTGATCGC
TGCTGCGCCG AGTTTGAAGG GATTTATGTC AGTCAGCCAG TTCCTCATAC ATAA
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| Protein sequence | MTASDERGQQ IASLLKELTE TWHQTIPVSE FMQISPLGYH DNRLKVTAPL SPNINLHQTM
FAGSIYTLAT LTGWGMLWLQ QRLAEVNGDI VLADGHIRYL APISGAPTAK VSWPDVDLSR
LTLGRRVKVK LVVEIYVGDR CCAEFEGIYV SQPVPHT
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