| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0305 |
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| Symbol | |
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| ID | 5609866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 359212 |
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| End bp | 359649 |
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| Gene Length | 438 bp |
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| Protein Length | 145 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931137 |
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| Product | D-tyrosyl-tRNA(Tyr) deacylase |
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| Protein accession | YP_001472046 |
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| Protein GI | 157373446 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1490] D-Tyr-tRNAtyr deacylase |
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| TIGRFAM ID | [TIGR00256] D-tyrosyl-tRNA(Tyr) deacylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0450666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000810401 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGATAGCCC TGATCCAACG TGTTACTCAA GCTAAAGTCG ATGTCGATGG AAAAACAATA
GGAGCCATAG ATAAAGGCTT ATTGGTATTG CTTGGTGTTG AGCGTGAAGA TGACTCGTTT
AAGATGGAGA AGCTTGCGAA TAAAGTCATG AGTTATCGTG TGTTTAGTGA TGAAAATGGA
AAGATGAACT TGAATGTGAG CCAGGCCGGT GGAGCCCTGC TTGTCGTATC GCAATTTACC
TTAGCCGCGG ATACCGGGCG TGGTTTAAGA CCCAGTTTCT CCGGGGCGGG CACGCCGGAT
CAGGCTAAAG TGCTATATGA AGAGTTTGTG GCGTTTTGCA GAGCCAAAGG CATGCCAACT
CAAACGGGGG AATTTGCGGC CGATATGCAG GTGAGTCTGG TCAATGATGG CCCCGTTACC
TTTAATCTCC AGGTGTAG
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| Protein sequence | MIALIQRVTQ AKVDVDGKTI GAIDKGLLVL LGVEREDDSF KMEKLANKVM SYRVFSDENG
KMNLNVSQAG GALLVVSQFT LAADTGRGLR PSFSGAGTPD QAKVLYEEFV AFCRAKGMPT
QTGEFAADMQ VSLVNDGPVT FNLQV
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