| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0295 |
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| Symbol | |
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| ID | 5609855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 349069 |
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| End bp | 349839 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640931127 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472036 |
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| Protein GI | 157373436 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4313] Protein involved in meta-pathway of phenol degradation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000520717 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACAACA CCTGGTACAA CGCCGATGCT CTGACCAATG ATAATGGCGA TGACACGGGG
CTGGATGTCG ATATCAATGC CTACGTTCAG GTGCATAGGC TGGTACACGT CACCGAAAAG
AAACTTTTCG GTGCCAACTG GGCCTATAAC GTCATCGTTC CCATGATTAA CAAAGAAACC
TCGATCGCCG ATTTCGGTGT CGATGACAGC ACCTCCTTCG CCTTGGGGGA TGTCGTTCTG
GAGCCTCTGG CCCTGTTCTG GTTCCGTGAT AACTATGAGG CGGCGCTTGG GTTATCAGTG
ATTGTCCCCA CGGGTGACTA TGACCCTGCA GACGCCGCAT CGCCCGGTAT GGGCTATTGG
TCAGGCATGT TAACGCTTGG AGGAACCTAC TACCTGGATT CAGACAAGTC CTGGAGTGTC
AGTGGCCTAA CCCGTACCCT GGTGCACTCG GAGCAGGACG ATACCGATAT TCGTCCGGGC
GCAGAATTTA TCATAGAGGG TGGCATAGGT AAGCAGTTCG CACTGGATGA ACATTGGTTG
CTTCGTCCGG GGTTGAGCTA TTGTGCCAGC TGGCAGATCA GCGATGACAG CCGGGATGGC
CACGGAACAT TAGCCGGTGA ACGTAAGACT GGCTATGGTA TTGGCGGTGA GGTCAACGTT
TTCTATCTGC CCTGGCTACT TCAGGGTAAC CTGCGCTACG TGAATGAGTT TGGCACCAAA
AATACCGCAA AAGGTTCATC ATTTGTCTTC ACCCTGACCA AGTCATTCTA A
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| Protein sequence | MYNTWYNADA LTNDNGDDTG LDVDINAYVQ VHRLVHVTEK KLFGANWAYN VIVPMINKET
SIADFGVDDS TSFALGDVVL EPLALFWFRD NYEAALGLSV IVPTGDYDPA DAASPGMGYW
SGMLTLGGTY YLDSDKSWSV SGLTRTLVHS EQDDTDIRPG AEFIIEGGIG KQFALDEHWL
LRPGLSYCAS WQISDDSRDG HGTLAGERKT GYGIGGEVNV FYLPWLLQGN LRYVNEFGTK
NTAKGSSFVF TLTKSF
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