Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_0274 |
Symbol | |
ID | 5609629 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 310954 |
End bp | 311307 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640931100 |
Product | tetraheme cytochrome c |
Protein accession | YP_001472015 |
Protein GI | 157373415 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00010475 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTAAAT TGAAAGCGGT ATTGGCGCTA ACATTAGGTT GCCTATTAAC ACTGTCTGTA CAGGCTGTTG AAGTACGTGA CCACCACAAA GAAGTGATCG GAAAGGATTG TAAGACATGT CACGACAATG GCATTAAACA ATTTCCGTCA GATCAATCAT GTTTGCAATG TCATGATGTT GATGATCTAG CAGAGCAGAC GGCTCGAAAT GAAGAAGACA AGTGGCAAAA CCCACACAAC AACTTGCACT ATGGCAAAGA GTTACCTTGC CAAGAGTGTC ATGGTGAACA CCAGCCTAAA CAGCCTATGT GCAACAACTG TCATACTTTT AAGTTTGATA AGCATAAGCA GTAG
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Protein sequence | MIKLKAVLAL TLGCLLTLSV QAVEVRDHHK EVIGKDCKTC HDNGIKQFPS DQSCLQCHDV DDLAEQTARN EEDKWQNPHN NLHYGKELPC QECHGEHQPK QPMCNNCHTF KFDKHKQ
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