| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0267 |
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| Symbol | |
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| ID | 5614219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 300775 |
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| End bp | 301671 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640931093 |
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| Product | putative pyruvate formate lyase activating enzyme |
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| Protein accession | YP_001472008 |
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| Protein GI | 157373408 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1180] Pyruvate-formate lyase-activating enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0149457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAATC GCCTGTCTAC GCTAAGTAAA ACGGCGTCAG TAAGCCAGAT TATCAATTTC
TCGTGTGTCG ATGGGCCTGG AAGCAGGCTC GTTGTTTTTT TGCAAGGGTG TAACTACAAC
TGCAAGAACT GCCACAATCC TCATACAATC GACATGTGTG ATAGTTGTGG CGACTGTATT
GCCCACTGTC CCACTCAGGC GCTGAGCATG GAGTCCATAG ATGGTAAAGA TGCCATCCGG
TGGAATAGCG ATTTATGCTC CGGGTGCGAT ACCTGCTTAG CCGTATGCCC CAAACAATCG
ACTCCTAAGA CCCAAGAGTA TAACGTCACC CAGATGCTGG AGATGATCCG CAAACAAGCG
TCCTTCATCT CAGGAATAAC CATTTCCGGC GGTGAAGCGA CGCTACAGCT TCATTTCATT
ATTGCCCTGT TTAAGGCCAT CAAGTCGAGT GATGATCTGC AACACCTATC TTGCATGCTT
GATAGCAATG GCAGCTTGAA TGAAACCGCC TGGCAAAAGC TCCTGCCCTA TATGGATGGT
GCCATGATAG ATCTAAAAGC CTGGCAACAG GAGACCCACA GATACATAAC GGGTCGGGAT
AACCACAGGG TATTGAGGTC AATTAACCTA TTAAACCTGC ACAATAAGTT ATACGAAGTA
CGATTATTAC AGATACCTGA AGTGACTGAT TTTGAGTCTG AAATTGATGC GTTGGCAGGT
TTCCTGACTC AGCTCCCCCC CTCGACACGA ATCAAGCTCA ATGCGTTTCA ACACCATGGT
GTGACGGGAG AGGCGTTAGC ATGGCGAGTC TGCTCTGAAG CGAATATTGA AAGACTGGCA
AGCCAACTGA CAGAGCGAGG AGTTAAGCAA CCTATCTTAC CCAGTGTTTA TCTCTAA
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| Protein sequence | MNNRLSTLSK TASVSQIINF SCVDGPGSRL VVFLQGCNYN CKNCHNPHTI DMCDSCGDCI
AHCPTQALSM ESIDGKDAIR WNSDLCSGCD TCLAVCPKQS TPKTQEYNVT QMLEMIRKQA
SFISGITISG GEATLQLHFI IALFKAIKSS DDLQHLSCML DSNGSLNETA WQKLLPYMDG
AMIDLKAWQQ ETHRYITGRD NHRVLRSINL LNLHNKLYEV RLLQIPEVTD FESEIDALAG
FLTQLPPSTR IKLNAFQHHG VTGEALAWRV CSEANIERLA SQLTERGVKQ PILPSVYL
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