| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0231 |
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| Symbol | |
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| ID | 5613632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 267075 |
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| End bp | 267734 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640931057 |
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| Product | cytoplasmic chaperone TorD family protein |
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| Protein accession | YP_001471972 |
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| Protein GI | 157373372 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCAA TCAACACATT CGATTTTCAA GCAGGCCAAG GGATAGCACG TATTCTGCAC
AACGTCCTGC TCAGTTATCC GACAGGCGAA CTGTTGAATA ACTTTAAGCA ATATGAGGTC
GTAGAGACCT GGCCCGAGTT CGGTCAATCA CAAGATAACC AAACGGGAAA AGCAGCACTG
AGTCGGTATC TGTCTCTGTA CTCGGATGAG CAGTTAGATG AGTTGAAACT CGATTATGGT
CAGCTATTTT TCGGACCCGA AGAACCCAAA GCCATGCCCT GGGGCTCGGT ATACCTGGGA
GAGGCGCAAC TACTCAACGA CAGATCGACA CTAGACTTGA TAGCCTTCTA TAAGCAGCAA
GGGATCGAAT TTGAGCTGGA GTACAATCAG CCGCAGGATC ATATTGCCCT GTTTTTTTCC
GTGATCGATC GGCTTCTGGG CCTGTTAGTC GAAAATCCCG ATGATGAATC CGTACGACGA
ACCTTGAGTG TGCTACTGCA GCATCATATG TTGCCATGGT CACATCGCTG CCTCGAGTTG
GCCATTGAGC ATTCACAAAC CGATTTCTAT TCAGGCATTG CCCATCTGGC GCTGGACTTT
CAAAAGGTAT TAGCTGAAGT GTTTCAGGTG ATCCCCATGC CGGTTCGTTT GTATCGATAG
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| Protein sequence | MPSINTFDFQ AGQGIARILH NVLLSYPTGE LLNNFKQYEV VETWPEFGQS QDNQTGKAAL
SRYLSLYSDE QLDELKLDYG QLFFGPEEPK AMPWGSVYLG EAQLLNDRST LDLIAFYKQQ
GIEFELEYNQ PQDHIALFFS VIDRLLGLLV ENPDDESVRR TLSVLLQHHM LPWSHRCLEL
AIEHSQTDFY SGIAHLALDF QKVLAEVFQV IPMPVRLYR
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