| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0227 |
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| Symbol | |
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| ID | 5613599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 260780 |
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| End bp | 261730 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640931053 |
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| Product | cytochrome c family protein |
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| Protein accession | YP_001471968 |
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| Protein GI | 157373368 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTATC GCGTTTTCTA CAACTTATTA TGTGGGGTGA TCACTGTCTT GTGTTTATCC
CTAAGTGCAC ATGCCGTTCC CTGGCAAAAT CTCACCGGTG AACAACTTGA ACAAAAGTTA
GCTGAAAAAT TCTCGGCTGG TGAATACTCA TCGAAAGGCG CCGACTCCTG CTTGATGTGT
CACCGTAAAG ATGAAGCCGT GATGGCTATT TTCGATGGTA CCCACGGCAT GATGAACAGT
AAGCAGTCGC CAATGGCGGG CCTGCAATGT GAAGCCTGTC ATGGTCCTCA AGGGAAGCAT
AACAGGGGCG GCAAGGAGCC GATGATCGCC TTCGGTACAG ACAGCAAGCT GTCGGCCTCC
GCGCAAAACA GTGTTTGTCA GGGGTGTCAT AACGACCCTA AACAGATGGC GTGGCACAGC
AGTACCCATA ACCTTGAAGA GGTGGCATGT GCCGACTGTC ATACTCTGCA CAGCGCCAAA
GACCCCGCTC TGGACAAGCT CAGTGTGAAT GACACCTGTA GCTCGTGCCA TACCAAAGAA
AAAGCCGATA TGAATAAGCG CTCATCTCAT CCTTTGAAAT GGGACCAGAT GACCTGTATC
GATTGTCACT CTCCTCATGG TTCTATGAGT GAAAGCGCTC TGAATAAGCC GACGATTAAT
GACACCTGCT ATTCATGTCA CAGTGAAAAA CGTGGTCCGG TTTTGTGGGA ACACGCACCG
GTCACAGAGA ACTGTGTCAC CTGTCATAAC CCTCATGGCA GCGTCAATGA AGGCATGCTG
AAAAGCCGTG CGCCTCAACT CTGTCAACAG TGTCATGCAC CCGACGGTCA TGCCAGTCGA
GTGGTGCAGG AACCGGGAAT GGATGCCTTC GGCGGTGGTA AGAGTTGCTT GAATTGTCAC
AGCAAGATCC ACGGTTCTAA CCATCCGTCA GGCAGCTTGC TGCAGCGTTA A
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| Protein sequence | MIYRVFYNLL CGVITVLCLS LSAHAVPWQN LTGEQLEQKL AEKFSAGEYS SKGADSCLMC
HRKDEAVMAI FDGTHGMMNS KQSPMAGLQC EACHGPQGKH NRGGKEPMIA FGTDSKLSAS
AQNSVCQGCH NDPKQMAWHS STHNLEEVAC ADCHTLHSAK DPALDKLSVN DTCSSCHTKE
KADMNKRSSH PLKWDQMTCI DCHSPHGSMS ESALNKPTIN DTCYSCHSEK RGPVLWEHAP
VTENCVTCHN PHGSVNEGML KSRAPQLCQQ CHAPDGHASR VVQEPGMDAF GGGKSCLNCH
SKIHGSNHPS GSLLQR
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