| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0225 |
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| Symbol | |
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| ID | 5613597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 257524 |
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| End bp | 258306 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640931051 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001471966 |
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| Protein GI | 157373366 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGCCC TGTCATGTCA TGGAGATAGC CGAAAGCCCG CACTGGTGAT GCTGCATGGT
TTTCTTGGCA GTAAAAACGA TTGGGACACG CTTATTTCGG ATTTACTCCC GCATTTCTAC
TGTATCTGCA TCGATCTTCC CGGCCATGGG CAGAGCCCTG TACTAGCGCC GGGTTCATCA
GCATTTGAGC GGGTCGCAGA TGCGATTCAG ACTACGCTAA ACAGCTTATC CATAGAAAGG
TACCACCTGT TAGGCTACTC GTTAGGCGGA CGTATCGCGC TGCATGTGGC ACAGGCATAC
CCGGACAATT TGCTCAGCCT GAGCCTGGAA TCATCCCATC CCGGCCTGCA GACGCTAGCA
GAGAGGCAGG TGAGAGCCCG TAACGACCAT AGCTGGAGCG AGAAACTCTC ATCTGTCCCC
ATCGAGTCTT TTCTCTCACA GTGGTACCAG CAGGGAGTAT TTGCCGAACT GACGGAGTCG
AAGCGCCAGG CCTTGATCCT CAAGCGCAGC AACAACAGCT CGGAAGCCCT GCTCACTGTT
TTTGAGTCAA CCTCTCTCGC TAAGCAGGAA GACTTGTGGC AACTACCGGG TCAACTGCAG
CTGCCCTGTC ATTATTTCGT GGGTAAGGAT GACAGTAAAT TTTCGGCATT GGCATCGCGG
TGGGCGAGTC TGGCAGATAT ACAGGTTCAT GAAATTGCCG ATGCCGGTCA TAACGTACAC
CTGGCATCTC CGACACTCTT CTGTCGACAG CTTATTAAAC ACTTAATCGA GGATGCTCAA
TGA
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| Protein sequence | MLALSCHGDS RKPALVMLHG FLGSKNDWDT LISDLLPHFY CICIDLPGHG QSPVLAPGSS
AFERVADAIQ TTLNSLSIER YHLLGYSLGG RIALHVAQAY PDNLLSLSLE SSHPGLQTLA
ERQVRARNDH SWSEKLSSVP IESFLSQWYQ QGVFAELTES KRQALILKRS NNSSEALLTV
FESTSLAKQE DLWQLPGQLQ LPCHYFVGKD DSKFSALASR WASLADIQVH EIADAGHNVH
LASPTLFCRQ LIKHLIEDAQ
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