| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_0224 |
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| Symbol | |
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| ID | 5613596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 256472 |
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| End bp | 257527 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640931050 |
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| Product | O-succinylbenzoate synthase |
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| Protein accession | YP_001471965 |
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| Protein GI | 157373365 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1441] O-succinylbenzoate synthase |
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| TIGRFAM ID | [TIGR01927] o-succinylbenzoic acid (OSB) synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCATCT CAGCGCTTCA CCTTTATCAA TATCAGATCC CTTTAGACAA GTTACTGCCG
GTCGGTAGCC AGCGCATCGA TGTCCGCAGA GGCTTAGTAT TAAAAGTTGA AGTCATAGAT
GAGACAGGAG AGACCCTCAC CGAGCAAGTT GAGATCGCGC CACTGTCAGG AATAGACATC
GATGGCAATC CACTGCACGG TTTCAGCAAG GAAAGCCTTA CTCAGGTGAG CGAAAAGCTG
GAGAGCCTGT TAGAACGGTT AGTTCAAAAA CCAATAGATA ACTTATTAGA TATCGCCGAT
ATTGAATATC TCCCATCCCT AGCCTTCGGT CTGAGTTTGA TGCACGCCAA GCTCAAAGGA
CAACTCAACG GACACACGAT ATCGCTTAAT GAGGACCTGA GGACAATTCC TCTGCTCTAC
CGTAACAGTG ATGAGTCGAT AAACGCACTG CGTCAACGCG TCGGTGACTT ACCTGCCGAT
ATGCATGCCG CCAAGGTCAA AGTTTCGCAA ACCTCACTGG AAGAGGAGGT TCAGCTCATC
CATCAGATAT TAGCTATCAG GCCAGATCTA AAACTCAGGT TAGACGCAAA CCGAGGCTTC
AGCCTGGAGC AAGCCATAGA TTTTGCCGCT TGCTTACCCC TTGCCTCTAT CGAATATATC
GAGGAGCCAT GTCAAAGACC GAGTGACAAC GCCGCTTTCT ATGAGGCAAT TGGCATGCCC
TGGGCGTTAG ATGAGAGCCT TAACGATCCT ATATTTCAAT TTGCCATGCA GCCGGGACTC
ACCGCGCTGG TCGTAAAGCC TATGCTGATT GGCAGTCTGG AGAAGTTACA AAAACTTCAA
GCCGAAGCCG AGCATTCAGG AGTCAGGTTT ATCTTAAGCT CCAGCCTGGA AGCCAGCTTA
GGCATAGAGG CTCTCGCAAG GTTAAGCCAG ATAATGATTC CCGATGAGAT CCCGGGGCTC
GATACCCTCA CAGCCTTTAG CTGTGATCTA TTAGTCGGCT CCGGGAAACC TCGCTGCCAA
TCATGGATCG ATCTCACCTT AATCAAAAGC TGTTAG
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| Protein sequence | MIISALHLYQ YQIPLDKLLP VGSQRIDVRR GLVLKVEVID ETGETLTEQV EIAPLSGIDI
DGNPLHGFSK ESLTQVSEKL ESLLERLVQK PIDNLLDIAD IEYLPSLAFG LSLMHAKLKG
QLNGHTISLN EDLRTIPLLY RNSDESINAL RQRVGDLPAD MHAAKVKVSQ TSLEEEVQLI
HQILAIRPDL KLRLDANRGF SLEQAIDFAA CLPLASIEYI EEPCQRPSDN AAFYEAIGMP
WALDESLNDP IFQFAMQPGL TALVVKPMLI GSLEKLQKLQ AEAEHSGVRF ILSSSLEASL
GIEALARLSQ IMIPDEIPGL DTLTAFSCDL LVGSGKPRCQ SWIDLTLIKS C
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